MirGeneDB 3.0
MirGeneDB ID

Mmr-Mir-17-P1d

Family name MIR-17 (all species)
Seed CGCACUG
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues Mmr-Mir-17-P1a  Mmr-Mir-17-P1c  Mmr-Mir-17-P2a  Mmr-Mir-17-P2c  Mmr-Mir-17-P4a  Mmr-Mir-17-P4c  Mmr-Mir-17-P4d 
Orthologues Ami-Mir-17-P1d  Bta-Mir-17-P1d  Cfa-Mir-17-P1d  Cja-Mir-17-P1d  Cmi-Mir-17-P1d  Cpi-Mir-17-P1d  Cpo-Mir-17-P1d  Dno-Mir-17-P1d  Eca-Mir-17-P1d  Ete-Mir-17-P1d  Gmo-Mir-17-P1d  Hsa-Mir-17-P1d  Laf-Mir-17-P1d  Lch-Mir-17-P1d  Loc-Mir-17-P1d  Mal-Mir-17-P1d  Mml-Mir-17-P1d  Mmu-Mir-17-P1d  Ocu-Mir-17-P1d  Pab-Mir-17-P1d  Rno-Mir-17-P1d  Sto-Mir-17-P1d  Tni-Mir-17-P1d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)		 CM007677.1: 30230278-30230339 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCCUCCCUCCCACUCCAGCCCUGCUGGGGCUAAAGUGCUGACAGUGCAGAUAGUGGUCCUCUCCGUGCUACCGCACUGUGGGUACUUGCUGCUCCAGUAGGGCACAUGCAGCGUCCAUGGAG
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Structure
        10          20        30         40        50          
UCCUCCCUCCCACUCCA--             UA-|      G       AGAUAGUGGUCC 
                   GCCCUGCUGGGGC   AAGUGCU ACAGUGC            \
                   CGGGAUGACCUCG   UUCAUGG UGUCACG            U
GAGGUACCUGCGACGUACA             UCG^      G       CCAUCGUGCCUC 
120       110       100        90        80        70
Deep sequencing
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CommentThere are Dicer cuts +1 and +2.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-17-P1d_5p*
mirBase accessionNone
Sequence 
0- UAAAGUGCUGACAGUGCAGAU -21
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Mature sequence

Mmr-Mir-17-P1d_3p
mirBase accessionNone
Sequence 
40- CCGCACUGUGGGUACUUGCUGC -62
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