MirGeneDB 2.1
MirGeneDB ID

Oan-Mir-17-P4a8

Family name MIR-17 (all species)
Seed AAAGUGC
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-20a-1
Paralogues Oan-Mir-17-P1a  Oan-Mir-17-P1c  Oan-Mir-17-P2a  Oan-Mir-17-P2c  Oan-Mir-17-P4a7  Oan-Mir-17-P4c 
Orthologues Aca-Mir-17-P4a  Ami-Mir-17-P4a  Bta-Mir-17-P4a  Cfa-Mir-17-P4a  Cli-Mir-17-P4a  Cmi-Mir-17-P4a  Cpi-Mir-17-P4a  Cpo-Mir-17-P4a  Dno-Mir-17-P4a  Ete-Mir-17-P4a  Gga-Mir-17-P4a  Gja-Mir-17-P4a  Hsa-Mir-17-P4a  Lch-Mir-17-P4a  Loc-Mir-17-P4a  Mdo-Mir-17-P4a  Mml-Mir-17-P4a  Mmu-Mir-17-P4a  Mun-Mir-17-P4a  Ocu-Mir-17-P4a  Pbv-Mir-17-P4a  Rno-Mir-17-P4a  Sha-Mir-17-P4a  Spt-Mir-17-P4a  Sto-Mir-17-P4a  Tgu-Mir-17-P4a  Xtr-Mir-17-P4a 
Node of Origin (locus) O. anatinus
Node of Origin (family) Vertebrata
Genome context
(mOrnAna1.p.v1_plustraces)		 NC_041737.1: 29148077-29148135 [-]
Precursor
(pre-Mir +30nt flank)
GGCUCGCAGAUCAAACAGUUCUUGUAGCACUAAAGUGCUUAUAGUGCAGGCAAUGUUUAGUCGUCUACUGCAUUAUGAGCACUUCAAGUCCUGCAAGCUGUAGAACUACAACUUCAGUA
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Structure
        10        20          30         40        50        
GGCUCGCAGAUCAAACAGUU--       C   A-|                GCAAUGUU 
                      CUUGUAG ACU  AAGUGCUUAUAGUGCAG        U
                      GAACGUC UGA  UUCACGAGUAUUACGUC        A
AUGACUUCAACAUCAAGAUGUC       C   AC^                AUCUGCUG 
       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Ce He Ki Te
Mature sequence

Oan-Mir-17-P4a8_5p
mirBase accessionMIMAT0007145
Sequence 
0- UAAAGUGCUUAUAGUGCAGGCA -22
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Star sequence

Oan-Mir-17-P4a8_3p*
mirBase accessionMIMAT0007146
Sequence 
36- ACUGCAUUAUGAGCACUUCAAGU -59
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