Mir
Gene
DB
2.1
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47 microRNA genes with seed UAAAGCU
Sort by genome coordinates
Motifs
MirGeneDB ID
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
UG
UGUG
CNNC
▼
Npo-Mir-9
None
MIR-9
CUUUGGU
None
None
JACATO010000367.1
1247889
1247950
-
Bilateria
Bilateria
Unknown
1
Esc-Mir-9
None
MIR-9
CUUUGGU
None
None
Esc-Mir-9_pre_SRIE01047099.1:2251295-2251556
101
162
+
Bilateria
Bilateria
No
1
Ovu-Mir-9
None
MIR-9
CUUUGGU
None
None
RXHP01026531.1
105328
105389
-
Bilateria
Bilateria
No
1
Tca-Mir-3893
tca-mir-3893
MIR-3893
UAAAGCU
MIMAT0018888
MIMAT0018889
LG5
7457235
7457292
+
T. castaneum
T. castaneum
No
1
Hsa-Mir-9-P1
hsa-mir-9-3
MIR-9
CUUUGGU
MIMAT0000441
MIMAT0000442
chr15
89368032
89368093
+
Gnathostomata
Bilateria
No
1
1
Mmu-Mir-9-P1
mmu-mir-9-3
MIR-9
CUUUGGU
MIMAT0000142
MIMAT0000143
chr7
79505279
79505340
+
Gnathostomata
Bilateria
No
1
1
Spt-Mir-9-P1
None
MIR-9
CUUUGGU
None
None
QEPC01014402.1
10342911
10342972
-
Gnathostomata
Bilateria
Unknown
1
1
Xla-Mir-9-P1d
None
MIR-9
CUUUGGU
None
None
NC_030729.1
44001647
44001708
-
X. laevis
Bilateria
No
1
1
Hsa-Mir-9-P2
hsa-mir-9-2
MIR-9
CUUUGGU
MIMAT0000441
MIMAT0000442
chr5
88666865
88666924
-
Gnathostomata
Bilateria
No
1
1
Mmu-Mir-9-P2
mmu-mir-9-2
MIR-9
CUUUGGU
MIMAT0000142
MIMAT0000143
chr13
83738821
83738880
+
Gnathostomata
Bilateria
No
1
1
Spt-Mir-9-P2
None
MIR-9
CUUUGGU
None
None
QEPC01014630.1
2369426
2369485
+
Gnathostomata
Bilateria
Unknown
1
1
Xla-Mir-9-P2d
None
MIR-9
CUUUGGU
None
None
NC_030725.1
151615023
151615081
+
X. laevis
Bilateria
No
1
Hsa-Mir-9-P3
hsa-mir-9-1
MIR-9
CUUUGGU
MIMAT0000441
MIMAT0000442
chr1
156420353
156420414
-
Gnathostomata
Bilateria
No
1
1
Mmu-Mir-9-P3
mmu-mir-9-1
MIR-9
CUUUGGU
MIMAT0000142
MIMAT0000143
chr3
88215613
88215674
+
Gnathostomata
Bilateria
No
1
1
Spt-Mir-9-P3
None
MIR-9
CUUUGGU
None
None
QEPC01015423.1
5228264
5228325
+
Gnathostomata
Bilateria
Unknown
1
1
Xla-Mir-9-P3d
None
MIR-9
CUUUGGU
None
None
NC_030739.1
93000179
93000240
+
X. laevis
Bilateria
No
1
1
Hme-Mir-9-o4
None
MIR-9
UAAAGCU
None
None
HE671859
114241
114299
-
H. melpomene
Bilateria
No
1
Spt-Mir-9-P4
None
MIR-9
CUUUGGU
None
None
QEPC01010893.1
4822954
4823013
-
Gnathostomata
Bilateria
Unknown
1
1
1
Xla-Mir-9-P4d
None
MIR-9
CUUUGGU
None
None
NW_016694812.1
1485278
1485337
-
X. laevis
Bilateria
No
1
1
Tca-Mir-9-o7
tca-mir-9b
MIR-9
UUUGGUA
MIMAT0019134
MIMAT0019135
KQ972687
113154
113211
-
T. castaneum
Bilateria
No
1
Dmo-Mir-9-P9
dmo-mir-4
MIR-9
UAAAGCU
None
MIMAT0008629
scaffold_6496
20936638
20936694
-
Drosophila
Bilateria
No
1
Dme-Mir-9-P9
dme-mir-4
MIR-9
UAAAGCU
MIMAT0020785
MIMAT0000109
2R
19661300
19661356
-
Drosophila
Bilateria
No
1
Dsi-Mir-9-P9
dsi-mir-4
MIR-9
UAAAGCU
None
MIMAT0008842
2R
16151148
16151204
-
Drosophila
Bilateria
No
1
Dya-Mir-9-P9
dya-mir-4
MIR-9
UAAAGCU
None
MIMAT0009058
2R
13623927
13623983
+
Drosophila
Bilateria
No
1
Dan-Mir-9-P9
dan-mir-4
MIR-9
UAAAGCU
None
MIMAT0008427
scaffold_13266
9731536
9731592
+
Drosophila
Bilateria
No
1
Asu-Mir-9-o18
asu-mir-79
MIR-9
UAAAGCU
MIMAT0021472
MIMAT0021473
Scaffold46
2189447
2189505
-
A. suum
Bilateria
No
1
1
Sme-Mir-9-P30
sme-mir-79
MIR-9
UAAAGCU
MIMAT0012108
MIMAT0003988
NNSW01000017_dd_Smes_g4_17
1530998
1531058
-
S. mediterranea
Bilateria
No
1
Xla-Mir-9-P1c
None
MIR-9
CUUUGGU
None
None
NC_030728.1
99731313
99731374
+
X. laevis
Bilateria
No
1
1
Xla-Mir-9-P2c
None
MIR-9
CUUUGGU
None
None
NC_030724.1
182078649
182078707
+
X. laevis
Bilateria
No
1
Xla-Mir-9-P3c
None
MIR-9
CUUUGGU
None
None
NC_030738.1
109009154
109009215
+
X. laevis
Bilateria
No
1
1
Xla-Mir-9-P4c
None
MIR-9
CUUUGGU
None
None
NC_030724.1
110894599
110894658
+
X. laevis
Bilateria
No
1
1
Tca-Mir-9-o9-v1
tca-mir-9d
MIR-9
UAAAGCU
MIMAT0018748
MIMAT0018749
LG5
7455728
7455787
+
T. castaneum
Bilateria
No
1
Bge-Mir-9-o11-v2
None
MIR-9
UUUGGUG
None
None
KZ614731.1
668641
668699
-
B. germanica
Bilateria
No
1
Dmo-Mir-9-P12-v2
dmo-mir-79
MIR-9
UAAAGCU
None
MIMAT0008690
scaffold_6500
7202147
7202208
+
Diptera
Bilateria
No
1
Bpl-Mir-9
None
MIR-9
UAAAGCU
None
None
QEOQ01000508.1
5682168
5682235
-
Bilateria
Bilateria
No
Hme-Mir-9-o3
hme-mir-79
MIR-9
UAAAGCU
None
MIMAT0024987
HE669612
9693
9752
-
H. melpomene
Bilateria
No
Cel-Mir-9-P14
cel-mir-75
MIR-9
UAAAGCU
MIMAT0015108
MIMAT0000047
chrX
2372475
2372534
+
Caenorhabditis
Bilateria
No
Cbr-Mir-9-P14
cbr-mir-75
MIR-9
UAAAGCU
None
MIMAT0000484
X
4419753
4419815
-
Caenorhabditis
Bilateria
No
Cel-Mir-9-P15
cel-mir-79
MIR-9
UAAAGCU
MIMAT0020322
MIMAT0000051
chrI
9332964
9333027
+
Caenorhabditis
Bilateria
No
Cbr-Mir-9-P15
cbr-mir-79
MIR-9
UAAAGCU
None
MIMAT0000486
I
1849428
1849490
+
Caenorhabditis
Bilateria
No
Sko-Mir-9-v1
sko-mir-9
MIR-9
CUUUGGU
MIMAT0009610
MIMAT0009618
NW_003125887.1
164505
164564
-
Bilateria
Bilateria
No
1
1
Pfl-Mir-9-v1
None
MIR-9
CUUUGGU
None
None
LD344854.1
129993
130052
+
Bilateria
Bilateria
No
1
1
Aae-Mir-9-P12-v2
aae-mir-79
MIR-9
UAAAGCU
MIMAT0014294
MIMAT0014295
supercont1.785
213278
213337
+
Diptera
Bilateria
No
Dme-Mir-9-P12-v2
dme-mir-79
MIR-9
UAAAGCU
MIMAT0020814
MIMAT0000352
2L
16698572
16698634
+
Diptera
Bilateria
No
Dsi-Mir-9-P12-v2
None
MIR-9
UAAAGCU
None
None
2L
16226326
16226388
+
Diptera
Bilateria
No
Dya-Mir-9-P12-v2
dya-mir-79
MIR-9
UAAAGCU
None
MIMAT0009124
2R
4404435
4404497
-
Diptera
Bilateria
No
Dan-Mir-9-P12-v2
dan-mir-79
MIR-9
UAAAGCU
None
MIMAT0008430
scaffold_12916
15864734
15864795
-
Diptera
Bilateria
No
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