MirGeneDB 3.0
MirGeneDB ID

Aca-Mir-122

Family name MIR-122 (all species)
Seed GGAGUGU
Species Green anole lizard (Anolis carolinensis)
MiRBase ID aca-mir-122
Paralogues
Orthologues Ami-Mir-122  Bta-Mir-122  Cfa-Mir-122  Cja-Mir-122  Cli-Mir-122  Cmi-Mir-122  Cpi-Mir-122  Cpo-Mir-122  Dno-Mir-122  Dre-Mir-122  Ebu-Mir-122-P3  Ebu-Mir-122-P4  Eca-Mir-122  Ete-Mir-122  Gga-Mir-122-P1  Gga-Mir-122-P2  Gja-Mir-122  Gmo-Mir-122  Hsa-Mir-122  Laf-Mir-122  Lch-Mir-122  Loc-Mir-122  Mal-Mir-122  Mdo-Mir-122  Mml-Mir-122  Mmr-Mir-122  Mmr-Mir-122-as  Mmu-Mir-122  Mun-Mir-122  Neu-Mir-122  Oan-Mir-122  Ocu-Mir-122  Pab-Mir-122  Pbv-Mir-122  Pma-Mir-122  Rno-Mir-122  Sha-Mir-122  Spt-Mir-122  Sto-Mir-122  Tgu-Mir-122  Tni-Mir-122  Xla-Mir-122-P5  Xla-Mir-122-P6  Xtr-Mir-122 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(anoCar2)		 GL343213.1: 2690958-2691015 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUUAAGGAUCUUCUUUCCUGCUGGAGCUGUGGAGUGUGACAAUGGUGUUUGUAUCCAAUCCGUCAAACGCCAUUAUCACACUAAAUAGCUACUGCUAGAGAAGCCAUCGGUUCAGGU
Get precursor sequence
Structure
        10         20         30        40        50        
CCUUAAGGAUCUUCUUUC-  -| UGG      GG       C           UAUCC 
                   CU GC   AGCUGU  AGUGUGA AAUGGUGUUUG     A
                   GA CG   UCGAUA  UCACACU UUACCGCAAAC     A
UGGACUUGGCUACCGAAGA  U^ UCA      AA       A           UGCCU 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sk Ta Ta To Wh
Mature sequence

Aca-Mir-122_5p
mirBase accessionMIMAT0021723
Sequence 
0- UGGAGUGUGACAAUGGUGUUUG -22
Get sequence
Star sequence

Aca-Mir-122_3p*
mirBase accessionMIMAT0021724
Sequence 
36- AACGCCAUUAUCACACUAAAUA -58
Get sequence