MirGeneDB 3.0
MirGeneDB ID

Cfa-Mir-150

Family name MIR-150 (all species)
Seed CUCCCAA
Species Dog (Canis familiaris)
MiRBase ID cfa-mir-150
Paralogues
Orthologues Aca-Mir-150  Ami-Mir-150  Bta-Mir-150  Cja-Mir-150  Cmi-Mir-150  Cpo-Mir-150  Dno-Mir-150  Dre-Mir-150  Eca-Mir-150  Ete-Mir-150  Gja-Mir-150  Gmo-Mir-150  Hsa-Mir-150  Laf-Mir-150  Lch-Mir-150  Loc-Mir-150  Mal-Mir-150  Mdo-Mir-150  Mml-Mir-150  Mmr-Mir-150  Mmu-Mir-150  Mun-Mir-150  Neu-Mir-150  Oan-Mir-150  Ocu-Mir-150  Pab-Mir-150  Pbv-Mir-150  Rno-Mir-150  Sha-Mir-150  Spt-Mir-150  Sto-Mir-150  Tni-Mir-150  Xla-Mir-150-P1  Xla-Mir-150-P2  Xtr-Mir-150 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(canFam3_add)		 chr1: 106998756-106998812 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCAGCAGCUCCUCUCUCCUCUCGGCCCUGUCUCCCAACCCUUGUACCAGUGCUGUGCCUCAGUCCCUGGUACAGGCAUGGGGGGCAGGGACCUGGGGACCCCCAGCAGCACCGGCC
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Structure
        10          20         30        40        50        
GGCAGCAGCUCCUCUCU--|   UC  -            ACC          UGCUGUG 
                   CCUC  GG CCCUGUCUCCCA   CUUGUACCAG       C
                   GGGG  CC GGGACGGGGGGU   GGACAUGGUC       C
CCGGCCACGACGACCCCCA^   U-  A            AC-          CCUGACU 
     110       100         90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
An An An Bl Ce Co He Hi Hi Hy Ki Ki Li Lu Ov Sk Te Te
Mature sequence

Cfa-Mir-150_5p
mirBase accessionMIMAT0006602
Sequence 
0- UCUCCCAACCCUUGUACCAGUG -22
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Proposed targets TargetScanVert: cfa-miR-150
miRDB: MIMAT0006602
Star sequence

Cfa-Mir-150_3p*
mirBase accessionNone
Sequence 
36- CUGGUACAGGCAUGGGGGGCA -57
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