MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-150

Family name MIR-150 (all species)
Seed CUCCCAA
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues
Orthologues Aca-Mir-150  Ami-Mir-150  Bta-Mir-150  Cfa-Mir-150  Cja-Mir-150  Cmi-Mir-150  Cpo-Mir-150  Dno-Mir-150  Dre-Mir-150  Eca-Mir-150  Ete-Mir-150  Gja-Mir-150  Gmo-Mir-150  Hsa-Mir-150  Laf-Mir-150  Lch-Mir-150  Loc-Mir-150  Mal-Mir-150  Mdo-Mir-150  Mml-Mir-150  Mmr-Mir-150  Mmu-Mir-150  Mun-Mir-150  Neu-Mir-150  Oan-Mir-150  Ocu-Mir-150  Pab-Mir-150  Pbv-Mir-150  Rno-Mir-150  Sha-Mir-150  Spt-Mir-150  Tni-Mir-150  Xla-Mir-150-P1  Xla-Mir-150-P2  Xtr-Mir-150 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCA_003427355_STO_add)		 BFAA01228007.1: 131-190 [+]
Precursor
(pre-Mir +30nt flank)
AAGGUCUUGACCCCUGAACCCAGUCCUCUCUCUCCCAACCCUUGUACCAGUGCUAGAAUUGUAAAUCACUGGGACAAGGGCUGGAUGAGAGAGAGCCGGGAACCUAGAGGUCGUGGAGAU
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Structure
        10          20        30        40        50         
AAGGUCUUGACCCCUGAA--|  A UC       UC   A       A      CUAGAA 
                    CCC G  CUCUCUC  CCA CCCUUGU CCAGUG      U
                    GGG C  GAGAGAG  GGU GGGAACA GGUCAC      U
UAGAGGUGCUGGAGAUCCAA^  C GA       UA   C       G      UAAAUG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Sto-Mir-150_5p
mirBase accessionNone
Sequence 
0- UCUCCCAACCCUUGUACCAGUG -22
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Star sequence

Sto-Mir-150_3p*
mirBase accessionNone
Sequence 
38- CUGGGACAAGGGCUGGAUGAGA -60
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