MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-150-P2

Family name MIR-150 (all species)
Seed CUCCCAA
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-150-P1 
Orthologues Aca-Mir-150  Ami-Mir-150  Bta-Mir-150  Cfa-Mir-150  Cja-Mir-150  Cmi-Mir-150  Cpo-Mir-150  Dno-Mir-150  Dre-Mir-150  Eca-Mir-150  Ete-Mir-150  Gja-Mir-150  Gmo-Mir-150  Hsa-Mir-150  Laf-Mir-150  Lch-Mir-150  Loc-Mir-150  Mal-Mir-150  Mdo-Mir-150  Mml-Mir-150  Mmr-Mir-150  Mmu-Mir-150  Mun-Mir-150  Neu-Mir-150  Oan-Mir-150  Ocu-Mir-150  Pab-Mir-150  Pbv-Mir-150  Rno-Mir-150  Sha-Mir-150  Spt-Mir-150  Sto-Mir-150  Tni-Mir-150  Xtr-Mir-150 
Node of Origin (locus) X. laevis
Node of Origin (family) Gnathostomata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030737.1: 77481423-77481480 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUGAAUUGUUAUAAUGGUCCACUCUUUCUCUCUCCCAACCCUUGUACCAGAUUGGUAAUAGGAACUCUGGUACAGAGGAUGGCUGAAAGGAAGCAGUGGAGAAUCCGGCUCCUGACCA
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Structure
        10         20         30        40        50        
GUGAAUUGUUAUAAUGG-      -|     C  UC   A  C          UUGGUA 
                  UCCACU CUUUCU UC  CCA CC UUGUACCAGA      A
                  AGGUGA GAAGGA AG  GGU GG GACAUGGUCU      U
ACCAGUCCUCGGCCUAAG      C^     A  UC   A  A          CAAGGA 
      110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut +1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Em
Mature sequence

Xla-Mir-150-P2_5p
mirBase accessionNone
Sequence 
0- UCUCCCAACCCUUGUACCAGAUU -23
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Star sequence

Xla-Mir-150-P2_3p*
mirBase accessionNone
Sequence 
35- UCUGGUACAGAGGAUGGCUGAAA -58
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