MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-150

Family name MIR-150 (all species)
Seed CUCCCAA
Species Horse (Equus caballus)
MiRBase ID eca-mir-150
Paralogues
Orthologues Aca-Mir-150  Ami-Mir-150  Bta-Mir-150  Cfa-Mir-150  Cja-Mir-150  Cmi-Mir-150  Cpo-Mir-150  Dno-Mir-150  Dre-Mir-150  Ete-Mir-150  Gja-Mir-150  Gmo-Mir-150  Hsa-Mir-150  Laf-Mir-150  Lch-Mir-150  Loc-Mir-150  Mal-Mir-150  Mdo-Mir-150  Mml-Mir-150  Mmr-Mir-150  Mmu-Mir-150  Mun-Mir-150  Neu-Mir-150  Oan-Mir-150  Ocu-Mir-150  Pab-Mir-150  Pbv-Mir-150  Rno-Mir-150  Sha-Mir-150  Spt-Mir-150  Sto-Mir-150  Tni-Mir-150  Xla-Mir-150-P1  Xla-Mir-150-P2  Xtr-Mir-150 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009157.1: 19592434-19592490 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGCAGCGGCUCGUCUCUCCCCACGGCCCUGUCUCCCAACCCUUGUACCAGUGCUGUGCCUCGGUCCCUGGUACAGGCAUGGGGGGCAGGGACCUGGGGGCACCAGCAGCGCCGGGCC
Get precursor sequence
Structure
        10          20         30        40        50        
AGCAGCGGCUCGUCUCU--|    C  -            ACC          UGCUGUG 
                   CCCCA GG CCCUGUCUCCCA   CUUGUACCAG       C
                   GGGGU CC GGGACGGGGGGU   GGACAUGGUC       C
CCGGGCCGCGACGACCACG^    -  A            AC-          CCUGGCU 
     110       100         90        80         70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ps Bo Ca Em En En En En En En En Gl He He Ho Im Ki Li Lo Lu Ma Ma Mi Pl Sp Te Tr Ut Ut Yo
Mature sequence

Eca-Mir-150_5p
mirBase accessionMIMAT0013011
Sequence 
0- UCUCCCAACCCUUGUACCAGUG -22
Get sequence
Star sequence

Eca-Mir-150_3p* (predicted)
mirBase accessionNone
Sequence 
36- CUGGUACAGGCAUGGGGGGCA -57
Get sequence