MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-150

Family name MIR-150 (all species)
Seed CUCCCAA
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Aca-Mir-150  Ami-Mir-150  Bta-Mir-150  Cfa-Mir-150  Cja-Mir-150  Cmi-Mir-150  Cpo-Mir-150  Dno-Mir-150  Dre-Mir-150  Eca-Mir-150  Ete-Mir-150  Gja-Mir-150  Gmo-Mir-150  Hsa-Mir-150  Laf-Mir-150  Lch-Mir-150  Loc-Mir-150  Mal-Mir-150  Mdo-Mir-150  Mml-Mir-150  Mmr-Mir-150  Mmu-Mir-150  Mun-Mir-150  Neu-Mir-150  Oan-Mir-150  Ocu-Mir-150  Pbv-Mir-150  Rno-Mir-150  Sha-Mir-150  Spt-Mir-150  Sto-Mir-150  Tni-Mir-150  Xla-Mir-150-P1  Xla-Mir-150-P2  Xtr-Mir-150 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054699.2: 55702562-55702617 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCAGCGGCAGCUCCUCUCCCCAUGGCCCUGUCUCCCAACCCUUGUACCAGUGCUGGGCUCAGACCCUGGUACAGGCCUGGGGGACAGGGACCUGGGGACCCCGGCACCGGCAGGCC
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Structure
        10          20         30        40        50        
GCAGCGGCAGCUCCUCU--|    U  -            AC   U       UGCUGGG 
                   CCCCA GG CCCUGUCUCCCA  CCU GUACCAG       \
                   GGGGU CC GGGACAGGGGGU  GGA CAUGGUC       C
CCGGACGGCCACGGCCCCA^    -  A            CC   -       CCAGACU 
    110       100         90        80         70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Li Li
Mature sequence

Pab-Mir-150_5p (predicted)
mirBase accessionNone
Sequence 
0- UCUCCCAACCCUUGUACCAGUG -22
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Star sequence

Pab-Mir-150_3p* (predicted)
mirBase accessionNone
Sequence 
35- CUGGUACAGGCCUGGGGGACA -56
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