MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-150

Family name MIR-150 (all species)
Seed CUCCCAA
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID
Paralogues
Orthologues Aca-Mir-150  Ami-Mir-150  Bta-Mir-150  Cfa-Mir-150  Cja-Mir-150  Cmi-Mir-150  Cpo-Mir-150  Dno-Mir-150  Dre-Mir-150  Eca-Mir-150  Ete-Mir-150  Gja-Mir-150  Gmo-Mir-150  Hsa-Mir-150  Laf-Mir-150  Lch-Mir-150  Loc-Mir-150  Mal-Mir-150  Mdo-Mir-150  Mml-Mir-150  Mmr-Mir-150  Mmu-Mir-150  Mun-Mir-150  Neu-Mir-150  Oan-Mir-150  Ocu-Mir-150  Pab-Mir-150  Pbv-Mir-150  Rno-Mir-150  Sha-Mir-150  Spt-Mir-150  Sto-Mir-150  Xla-Mir-150-P1  Xla-Mir-150-P2  Xtr-Mir-150 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 Un_random: 55607759-55607819 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACCAGUCCUUGUGCCUUUCUUGGUUCAGUUACUCCCAAUCCUUGUAUCAGUGUCUUGACACAACUGUGGCACUGGACAGGUUUGGGGGGGGCUAUACCAAGAAUAGAUGGCAUACAUAAUU
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Structure
        10          20        30        40        50        60 
ACCAGUCCUUGUGCCUU--|      UC   UA       U   U  A       CUUGACA 
                   UCUUGGU  AGU  CUCCCAA CCU GU UCAGUGU       \
                   AGAACCA  UCG  GGGGGUU GGA CA GGUCACG       C
UUAAUACAUACGGUAGAUA^      UA   GG       U   -  -       GUGUCAA 
 .       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Sp Sp Sp To
Mature sequence

Tni-Mir-150_5p
mirBase accessionNone
Sequence 
0- ACUCCCAAUCCUUGUAUCAGUGU -23
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Star sequence

Tni-Mir-150_3p*
mirBase accessionNone
Sequence 
39- CACUGGACAGGUUUGGGGGGGG -61
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