MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-150

Family name MIR-150 (all species)
Seed CUCCCAA
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues
Orthologues Aca-Mir-150  Ami-Mir-150  Bta-Mir-150  Cfa-Mir-150  Cja-Mir-150  Cmi-Mir-150  Cpo-Mir-150  Dno-Mir-150  Dre-Mir-150  Eca-Mir-150  Ete-Mir-150  Gmo-Mir-150  Hsa-Mir-150  Laf-Mir-150  Lch-Mir-150  Loc-Mir-150  Mal-Mir-150  Mdo-Mir-150  Mml-Mir-150  Mmr-Mir-150  Mmu-Mir-150  Mun-Mir-150  Neu-Mir-150  Oan-Mir-150  Ocu-Mir-150  Pab-Mir-150  Pbv-Mir-150  Rno-Mir-150  Sha-Mir-150  Spt-Mir-150  Sto-Mir-150  Tni-Mir-150  Xla-Mir-150-P1  Xla-Mir-150-P2  Xtr-Mir-150 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015164218.1: 21289-21345 [-]
Precursor
(pre-Mir +30nt flank)
AGGAUUUGGGCACACACCUCUCUCCCCCUCUCUCCCAACCCUUGUACCAGUGCUAAUCGAACACCACUGGUACAGAGGAUGGAGGGUAGGGUGGGGCAGAGACAGAGCAGCUCUGAG
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Structure
        10        20           30        40        50        
AGGAUUUGGGCACACACCU  -    -    -|     CAA  C           CUAAU 
                   CU CUCC CCCU CUCUCC   CC UUGUACCAGUG     C
                   GA GGGG GGGA GGGAGG   GG GACAUGGUCAC     G
GAGUCUCGACGAGACAGA-  C    U    U^     UA-  A           CACAA 
     110       100         90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Gja-Mir-150_5p
mirBase accessionNone
Sequence 
0- UCUCCCAACCCUUGUACCAGUG -22
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Star sequence

Gja-Mir-150_3p* (predicted)
mirBase accessionNone
Sequence 
36- CUGGUACAGAGGAUGGAGGGU -57
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