MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-150

Family name MIR-150 (all species)
Seed CUCCCAA
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID sha-mir-150
Paralogues
Orthologues Aca-Mir-150  Ami-Mir-150  Bta-Mir-150  Cfa-Mir-150  Cja-Mir-150  Cmi-Mir-150  Cpo-Mir-150  Dno-Mir-150  Dre-Mir-150  Eca-Mir-150  Ete-Mir-150  Gja-Mir-150  Gmo-Mir-150  Hsa-Mir-150  Laf-Mir-150  Lch-Mir-150  Loc-Mir-150  Mal-Mir-150  Mdo-Mir-150  Mml-Mir-150  Mmr-Mir-150  Mmu-Mir-150  Mun-Mir-150  Neu-Mir-150  Oan-Mir-150  Ocu-Mir-150  Pab-Mir-150  Pbv-Mir-150  Rno-Mir-150  Spt-Mir-150  Sto-Mir-150  Tni-Mir-150  Xla-Mir-150-P1  Xla-Mir-150-P2  Xtr-Mir-150 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Gnathostomata
Genome context
(DEVIL_add)		 GL849778.1: 132911-132966 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCCAGCCCGUCUGCCUGUCCCGGAGCCCCUUCUCCCAACCCUCGUACCAGAGUCCAUCCGAGACCCGGUACGGGCUGUGGGGGAUGGGGAGUCGGGGGUAAGCCGCUUGAGCCGGA
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Structure
        10          20        30        40        50        
CCCAGCCCGUCUGCCUG--|     AG    U       ACC        AGA  CCAU 
                   UCCCGG  CCCC UCUCCCA   CUCGUACC   GU    \
                   GGGGCU  GGGG AGGGGGU   GGGCAUGG   CA    C
AGGCCGAGUUCGCCGAAUG^     GA    U       GUC        CC-  GAGC 
    110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-150_5p
mirBase accessionMIMAT0022806
Sequence 
0- UCUCCCAACCCUCGUACCAGAGU -23
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Star sequence

Sha-Mir-150_3p*
mirBase accessionNone
Sequence 
34- CCGGUACGGGCUGUGGGGGAUG -56
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