MirGeneDB 3.0
MirGeneDB ID

Dno-Mir-135-P4

Family name MIR-135 (all species)
Seed AUGGCUU
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-135b
Paralogues Dno-Mir-135-P1  Dno-Mir-135-P2 
Orthologues Aca-Mir-135-P4  Ami-Mir-135-P4  Bta-Mir-135-P4  Cfa-Mir-135-P4  Cja-Mir-135-P4  Cli-Mir-135-P4  Cmi-Mir-135-P4  Cpi-Mir-135-P4  Cpo-Mir-135-P4  Dre-Mir-135-P4a  Dre-Mir-135-P4b  Eca-Mir-135-P4  Ete-Mir-135-P4  Gga-Mir-135-P4  Gja-Mir-135-P4  Gmo-Mir-135-P4a  Gmo-Mir-135-P4b  Hsa-Mir-135-P4  Laf-Mir-135-P4  Lch-Mir-135-P4  Loc-Mir-135-P4  Mal-Mir-135-P4a  Mal-Mir-135-P4b  Mdo-Mir-135-P4  Mml-Mir-135-P4  Mmr-Mir-135-P4  Mmu-Mir-135-P4  Mun-Mir-135-P4  Neu-Mir-135-P4  Oan-Mir-135-P4  Ocu-Mir-135-P4  Pab-Mir-135-P4  Pbv-Mir-135-P4  Rno-Mir-135-P4  Sha-Mir-135-P4  Spt-Mir-135-P4  Sto-Mir-135-P4  Tgu-Mir-135-P4  Tni-Mir-135-P4a  Tni-Mir-135-P4b  Xla-Mir-135-P4  Xtr-Mir-135-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Chordata
Genome context
(dasNov3)		 JH563639: 28397-28457 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGCUGGAGCCCCUCUGCUCUGCCGCGGCCUAUGGCUUUUCAUUCCUAUGUGAUUGCUGCUCCAAACUCACGUAGGGCUAAAAGCCAUGGGGCUGCGGCGAGGGGCCUGCUCCNNNNNNNN
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Structure
        10          20        30         40        50        60
CUGCUGGAGCCCCUCUG--|  U          -         CAU          UUGCUG 
                   CUC GCCGCGGCCU AUGGCUUUU   UCCUAUGUGA      C
                   GAG CGGCGUCGGG UACCGAAAA   GGGAUGCACU      U
NNNNNNNNCCUCGUCCGGG^  -          G         UC-          CAAACC 
 .       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Dno-Mir-135-P4_5p
mirBase accessionMIMAT0047642
Sequence 
0- UAUGGCUUUUCAUUCCUAUGUGA -23
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Star sequence

Dno-Mir-135-P4_3p*
mirBase accessionMIMAT0047643
Sequence 
39- ACGUAGGGCUAAAAGCCAUGGG -61
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