MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-30-P1b

Family name MIR-30 (all species)
Seed GUAAACA
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-30-P1a  Mal-Mir-30-P1d  Mal-Mir-30-P2a  Mal-Mir-30-P2b  Mal-Mir-30-P2d 
Orthologues Aca-Mir-30-P1b  Ami-Mir-30-P1b  Bta-Mir-30-P1b  Cfa-Mir-30-P1b  Cja-Mir-30-P1b  Cli-Mir-30-P1b  Cmi-Mir-30-P1b  Cpi-Mir-30-P1b  Cpo-Mir-30-P1b  Dno-Mir-30-P1b  Dre-Mir-30-P1b  Eca-Mir-30-P1b  Ete-Mir-30-P1b  Gga-Mir-30-P1b  Gja-Mir-30-P1b  Gmo-Mir-30-P1b  Hsa-Mir-30-P1b  Laf-Mir-30-P1b  Lch-Mir-30-P1b  Loc-Mir-30-P1b  Mdo-Mir-30-P1b  Mml-Mir-30-P1b  Mmr-Mir-30-P1b  Mmu-Mir-30-P1b  Mun-Mir-30-P1b  Oan-Mir-30-P1b  Ocu-Mir-30-P1b  Pab-Mir-30-P1b  Pbv-Mir-30-P1b  Rno-Mir-30-P1b  Sha-Mir-30-P1b  Spt-Mir-30-P1b  Tgu-Mir-30-P1b  Tni-Mir-30-P1b  Xla-Mir-30-P1b1  Xla-Mir-30-P1b2  Xtr-Mir-30-P1b 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884871.1: 1647148-1647210 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUCCCAGGCUGGUUGGCAGUCAGGGCUACUGUAAACAUCCUUGACUGGAAGCUGGUGUUCGGUUCUGGGGCUUUCAGUCGGAUGUUUGCAGCAGCCAACUGCUAGUACCAUCACUACACCUG
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Structure
        10            20        30        40        50        60  
CUUCCCAGGCUGGUUGG----|   CAG    A            UU           GGUGUUC 
                     CAGU   GGCU CUGUAAACAUCC  GACUGGAAGCU       \
                     GUCA   CCGA GACGUUUGUAGG  CUGACUUUCGG       G
GUCCACAUCACUACCAUGAUC^   A--    C            --           GGUCUUG 
 120       110       100          90          80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-30-P1b_5p
mirBase accessionNone
Sequence 
0- UGUAAACAUCCUUGACUGGAAGCU -24
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Star sequence

Mal-Mir-30-P1b_3p*
mirBase accessionNone
Sequence 
41- CUUUCAGUCGGAUGUUUGCAGC -63
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