Mir-30-P2a

MirGeneDB ID

Mal-Mir-30-P2a

Family name

MIR-30 (all species)

Seed

GUAAACA

Species

Asian swamp eel (Monopterus albus)

MiRBase ID

Paralogues

Mal-Mir-30-P1a Mal-Mir-30-P1b Mal-Mir-30-P1d Mal-Mir-30-P2b Mal-Mir-30-P2d

Orthologues

Aca-Mir-30-P2a Ami-Mir-30-P2a Bta-Mir-30-P2a Cfa-Mir-30-P2a Cmi-Mir-30-P2a Cpi-Mir-30-P2a Cpo-Mir-30-P2a Dno-Mir-30-P2a Dre-Mir-30-P2a Ete-Mir-30-P2a Gga-Mir-30-P2a Gja-Mir-30-P2a Gmo-Mir-30-P2a Hsa-Mir-30-P2a Lch-Mir-30-P2a Loc-Mir-30-P2a Mdo-Mir-30-P2a Mml-Mir-30-P2a Mmu-Mir-30-P2a Mun-Mir-30-P2a Oan-Mir-30-P2a Ocu-Mir-30-P2a Pbv-Mir-30-P2a Rno-Mir-30-P2a Sha-Mir-30-P2a Spt-Mir-30-P2a Sto-Mir-30-P2a Tgu-Mir-30-P2a Tni-Mir-30-P2a Xla-Mir-30-P2a1 Xla-Mir-30-P2a2 Xtr-Mir-30-P2a

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Vertebrata

Genome context
(GCA_001952655.1_M_albus_1.0_genomic)

KV884842.1: 61478-61541 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CCUACAUCCUCUUUGUUCAGACUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUCAUUUGCAGCAGAGGCUGAGAGAAGGUUGUUUACUUGAACUGGCUGGAAGUGACACUGUGACUUUAA

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Structure

        10            20        30        40        50        60 
CCUACAUCCUCUUUGUU----|  A U       U       U   ACA       GUAAUCAU 
                     CAG C CAGUUCA GUAAACA CCU   CUCAGCU        U
                     GUC G GUCAAGU CAUUUGU GGA   GAGUCGG        U
AAUUUCAGUGUCACAGUGAAG^  - -       U       U   AGA       AGACGACG 
  120       110        100         90        80        70

Deep sequencing

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3' NTU

Motifs

Tissue expression

Fe	Fe	In	Ma	Ma

Mature sequence

Mal-Mir-30-P2a_5p

mirBase accession

None

Sequence

0- UGUAAACAUCCUACACUCAGCU -22

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Star sequence

Mal-Mir-30-P2a_3p*

mirBase accession

None

Sequence

42- CUGAGAGAAGGUUGUUUACUUG -64

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