MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-30-P2a

Family name MIR-30 (all species)
Seed GUAAACA
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-30-P1a  Mal-Mir-30-P1b  Mal-Mir-30-P1d  Mal-Mir-30-P2b  Mal-Mir-30-P2d 
Orthologues Aca-Mir-30-P2a  Ami-Mir-30-P2a  Bta-Mir-30-P2a  Cfa-Mir-30-P2a  Cja-Mir-30-P2a  Cmi-Mir-30-P2a  Cpi-Mir-30-P2a  Cpo-Mir-30-P2a  Dno-Mir-30-P2a  Dre-Mir-30-P2a  Eca-Mir-30-P2a  Ete-Mir-30-P2a  Gga-Mir-30-P2a  Gja-Mir-30-P2a  Gmo-Mir-30-P2a  Hsa-Mir-30-P2a  Laf-Mir-30-P2a  Lch-Mir-30-P2a  Loc-Mir-30-P2a  Mdo-Mir-30-P2a  Mml-Mir-30-P2a  Mmr-Mir-30-P2a  Mmu-Mir-30-P2a  Mun-Mir-30-P2a  Neu-Mir-30-P2a  Oan-Mir-30-P2a  Ocu-Mir-30-P2a  Pab-Mir-30-P2a  Pbv-Mir-30-P2a  Rno-Mir-30-P2a  Sha-Mir-30-P2a  Spt-Mir-30-P2a  Sto-Mir-30-P2a  Tgu-Mir-30-P2a  Tni-Mir-30-P2a  Xla-Mir-30-P2a1  Xla-Mir-30-P2a2  Xtr-Mir-30-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884842.1: 61478-61541 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCUACAUCCUCUUUGUUCAGACUCAGUUCAUGUAAACAUCCUACACUCAGCUGUAAUCAUUUGCAGCAGAGGCUGAGAGAAGGUUGUUUACUUGAACUGGCUGGAAGUGACACUGUGACUUUAA
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Structure
        10            20        30        40        50        60 
CCUACAUCCUCUUUGUU----|  A U       U       U   ACA       GUAAUCAU 
                     CAG C CAGUUCA GUAAACA CCU   CUCAGCU        U
                     GUC G GUCAAGU CAUUUGU GGA   GAGUCGG        U
AAUUUCAGUGUCACAGUGAAG^  - -       U       U   AGA       AGACGACG 
  120       110        100         90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-30-P2a_5p
mirBase accessionNone
Sequence 
0- UGUAAACAUCCUACACUCAGCU -22
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Star sequence

Mal-Mir-30-P2a_3p*
mirBase accessionNone
Sequence 
42- CUGAGAGAAGGUUGUUUACUUG -64
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