MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-30-P2a

Family name MIR-30 (all species)
Seed GUAAACA
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-30-P1a  Mun-Mir-30-P1b  Mun-Mir-30-P1d  Mun-Mir-30-P2b  Mun-Mir-30-P2d 
Orthologues Aca-Mir-30-P2a  Ami-Mir-30-P2a  Bta-Mir-30-P2a  Cfa-Mir-30-P2a  Cja-Mir-30-P2a  Cmi-Mir-30-P2a  Cpi-Mir-30-P2a  Cpo-Mir-30-P2a  Dno-Mir-30-P2a  Dre-Mir-30-P2a  Eca-Mir-30-P2a  Ete-Mir-30-P2a  Gga-Mir-30-P2a  Gja-Mir-30-P2a  Gmo-Mir-30-P2a  Hsa-Mir-30-P2a  Laf-Mir-30-P2a  Lch-Mir-30-P2a  Loc-Mir-30-P2a  Mal-Mir-30-P2a  Mdo-Mir-30-P2a  Mml-Mir-30-P2a  Mmr-Mir-30-P2a  Mmu-Mir-30-P2a  Neu-Mir-30-P2a  Oan-Mir-30-P2a  Ocu-Mir-30-P2a  Pab-Mir-30-P2a  Pbv-Mir-30-P2a  Rno-Mir-30-P2a  Sha-Mir-30-P2a  Spt-Mir-30-P2a  Sto-Mir-30-P2a  Tgu-Mir-30-P2a  Tni-Mir-30-P2a  Xla-Mir-30-P2a1  Xla-Mir-30-P2a2  Xtr-Mir-30-P2a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Mun_miRNA_loci)		 30-P2a_LR594632.1:595623275-595623416: 42-101 [-]
Precursor
(pre-Mir +30nt flank)
AAAUCAUUUAUUCUAUUGAGUUUUAGUUUAUGUAAACAUCCUACACUCAGCUAUGCCAUGUGAAUCGGCUGGGAGGUGGAUGUUUACUUCAACUGACUUCAAAUUGCUUCAUAUCUGAGA
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Structure
        10           20        30        40         50         
AAAUCAUUUAUUCUAUU---|  UU      UAU          U  A-       AUGCCA 
                    GAG  UUAGUU   GUAAACAUCC AC  CUCAGCU      U
                    CUU  AGUCAA   CAUUUGUAGG UG  GGGUCGG      G
AGAGUCUAUACUUCGUUAAA^  C-      CUU          -  GA       CUAAGU 
.       110       100         90        80         70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Mun-Mir-30-P2a_5p
mirBase accessionNone
Sequence 
0- UGUAAACAUCCUACACUCAGCU -22
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Star sequence

Mun-Mir-30-P2a_3p* (predicted)
mirBase accessionNone
Sequence 
38- CUGGGAGGUGGAUGUUUACUUC -60
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