MirGeneDB 2.1
MirGeneDB ID

Mun-Mir-30-P1a

Family name MIR-30 (all species)
Seed GUAAACA
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-30-P1b  Mun-Mir-30-P1d  Mun-Mir-30-P2a  Mun-Mir-30-P2b  Mun-Mir-30-P2d 
Orthologues Aca-Mir-30-P1a  Ami-Mir-30-P1a  Bta-Mir-30-P1a  Cfa-Mir-30-P1a  Cli-Mir-30-P1a  Cmi-Mir-30-P1a  Cpi-Mir-30-P1a  Cpo-Mir-30-P1a  Dno-Mir-30-P1a  Dre-Mir-30-P1a  Ete-Mir-30-P1a  Gga-Mir-30-P1a  Gja-Mir-30-P1a  Gmo-Mir-30-P1a  Hsa-Mir-30-P1a  Lch-Mir-30-P1a  Loc-Mir-30-P1a  Mal-Mir-30-P1a  Mdo-Mir-30-P1a  Mml-Mir-30-P1a  Mmu-Mir-30-P1a  Oan-Mir-30-P1a  Ocu-Mir-30-P1a  Pbv-Mir-30-P1a  Rno-Mir-30-P1a  Sha-Mir-30-P1a  Spt-Mir-30-P1a  Sto-Mir-30-P1a  Tgu-Mir-30-P1a  Tni-Mir-30-P1a  Xla-Mir-30-P1a1  Xla-Mir-30-P1a2  Xtr-Mir-30-P1a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Mun_miRNA_loci)		 30-P1a_LR594632.1:595629037-595629176: 40-101 [-]
Precursor
(pre-Mir +30nt flank)
GUCGAGUUAAGAUUUAUGCUAGUCUGUAACUGUAAACAUCCCCGACUGGAAGCUGUAUGUCACAUUCUAGCUUUCAGUCAGAUGUUUGCUGCUACUAGCCAUGCAGAACCUGCAUCUCCAGA
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Structure
        10              20        30        40        50        60 
GUCGAGUUAAGAUUUAU------|     CU   ACU         CCC           GUAUGU 
                       GCUAGU  GUA   GUAAACAUC   GACUGGAAGCU      C
                       CGAUCA  CGU   CGUUUGUAG   CUGACUUUCGA      A
AGACCUCUACGUCCAAGACGUAC^     U-   ---         A--           UCUUAC 
120       110       100         90           80          70
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Mun-Mir-30-P1a_5p
mirBase accessionNone
Sequence 
0- UGUAAACAUCCCCGACUGGAAGCU -24
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Star sequence

Mun-Mir-30-P1a_3p*
mirBase accessionNone
Sequence 
40- CUUUCAGUCAGAUGUUUGCUGC -62
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