MirGeneDB 3.0
MirGeneDB ID

Ete-Mir-30-P1a

Family name MIR-30 (all species)
Seed GUAAACA
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-30-P1b  Ete-Mir-30-P1d  Ete-Mir-30-P2a  Ete-Mir-30-P2b  Ete-Mir-30-P2d 
Orthologues Aca-Mir-30-P1a  Ami-Mir-30-P1a  Bta-Mir-30-P1a  Cfa-Mir-30-P1a  Cja-Mir-30-P1a  Cli-Mir-30-P1a  Cmi-Mir-30-P1a  Cpi-Mir-30-P1a  Cpo-Mir-30-P1a  Dno-Mir-30-P1a  Dre-Mir-30-P1a  Eca-Mir-30-P1a  Gga-Mir-30-P1a  Gja-Mir-30-P1a  Gmo-Mir-30-P1a  Hsa-Mir-30-P1a  Laf-Mir-30-P1a  Lch-Mir-30-P1a  Loc-Mir-30-P1a  Mal-Mir-30-P1a  Mdo-Mir-30-P1a  Mml-Mir-30-P1a  Mmr-Mir-30-P1a  Mmu-Mir-30-P1a  Mun-Mir-30-P1a  Neu-Mir-30-P1a  Oan-Mir-30-P1a  Ocu-Mir-30-P1a  Pab-Mir-30-P1a  Pbv-Mir-30-P1a  Rno-Mir-30-P1a  Sha-Mir-30-P1a  Spt-Mir-30-P1a  Sto-Mir-30-P1a  Tgu-Mir-30-P1a  Tni-Mir-30-P1a  Xla-Mir-30-P1a1  Xla-Mir-30-P1a2  Xtr-Mir-30-P1a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(echTel2)		 JH980295: 6797535-6797594 [+] UCSC
Precursor
(pre-Mir +30nt flank)
CCCGUGGAGCGACUCCCGAACGCCUGUUGCUGUAAACAUCCCCGACUGGAAGCUGUGACUCUGCCGAGCUUUCAGUCUGAUGUUUGCUCCAGCCAGCUGUUCAUGGGCAUCACCCUGUGU
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Structure
        10         20         30        40        50        60
CCCGUGGAGCGACUCCC-    -| CU    CU         CCC           GUGAC 
                  GAAC GC  GUUG  GUAAACAUC   GACUGGAAGCU     U
                  CUUG CG  CGAC  CGUUUGUAG   CUGACUUUCGA     C
UGUGUCCCACUACGGGUA    U^ AC    CU         U--           GCCGU 
.       110       100        90        80          70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Mature sequence

Ete-Mir-30-P1a_5p
mirBase accessionNone
Sequence 
0- UGUAAACAUCCCCGACUGGAAGCU -24
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Star sequence

Ete-Mir-30-P1a_3p* (predicted)
mirBase accessionNone
Sequence 
38- CUUUCAGUCUGAUGUUUGCUCC -60
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