MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-30-P1d

Family name MIR-30 (all species)
Seed GUAAACA
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-30-P1a  Mun-Mir-30-P1b  Mun-Mir-30-P2a  Mun-Mir-30-P2b  Mun-Mir-30-P2d 
Orthologues Aca-Mir-30-P1d  Ami-Mir-30-P1d  Bta-Mir-30-P1d  Cfa-Mir-30-P1d  Cja-Mir-30-P1d  Cli-Mir-30-P1d  Cmi-Mir-30-P1d3  Cmi-Mir-30-P1d4  Cpi-Mir-30-P1d  Cpo-Mir-30-P1d  Dno-Mir-30-P1d  Dre-Mir-30-P1d  Eca-Mir-30-P1d  Ete-Mir-30-P1d  Gga-Mir-30-P1d  Gja-Mir-30-P1d  Gmo-Mir-30-P1d  Hsa-Mir-30-P1d  Laf-Mir-30-P1d  Lch-Mir-30-P1d  Loc-Mir-30-P1d  Mal-Mir-30-P1d  Mdo-Mir-30-P1d  Mml-Mir-30-P1d  Mmr-Mir-30-P1d  Mmu-Mir-30-P1d  Neu-Mir-30-P1d  Oan-Mir-30-P1d  Ocu-Mir-30-P1d  Pab-Mir-30-P1d  Pbv-Mir-30-P1d  Rno-Mir-30-P1d  Sha-Mir-30-P1d  Spt-Mir-30-P1d  Sto-Mir-30-P1d3  Sto-Mir-30-P1d4  Tgu-Mir-30-P1d  Tni-Mir-30-P1d  Xla-Mir-30-P1d1  Xla-Mir-30-P1d2  Xtr-Mir-30-P1d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Mun_miRNA_loci)		 30-P1c_LR594642.1:205361550-205361813: 101-164 [+]
Precursor
(pre-Mir +30nt flank)
UCUGCAGUCUUUCUGGGUAGUAUUUGGGACUGUAAACAUCCUUGACUGGAAGCUGUAAAGUUCUGUAAAGAGCUUUUAGUCAGAUGUUUACAGCGGCAGGCUACCACAGUCACUCUCCGAGCAG
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Structure
        10         20         30        40        50        60  
UCUGCAGUCUUUCUGGGUA-   -|   GGA           CU            GUAAAGU 
                    GUA UUUG   CUGUAAACAUC  UGACUGGAAGCU       U
                    CAU GGAC   GACAUUUGUAG  ACUGAUUUUCGA       C
GACGAGCCUCUCACUGACAC   C^   GGC           --            GAAAUGU 
  120       110       100        90          80        70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Mun-Mir-30-P1d_5p
mirBase accessionNone
Sequence 
0- UGUAAACAUCCUUGACUGGAAGCU -24
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Star sequence

Mun-Mir-30-P1d_3p* (predicted)
mirBase accessionNone
Sequence 
42- CUUUUAGUCAGAUGUUUACAGC -64
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