MirGeneDB ID | Neu-Mir-30-P2b |
---|---|
Family name | MIR-30 (all species) |
Seed | GUAAACA |
Species | Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID | |
Paralogues | Neu-Mir-30-P1a Neu-Mir-30-P1d Neu-Mir-30-P2a Neu-Mir-30-P2d |
Orthologues | Aca-Mir-30-P2b Ami-Mir-30-P2b Bta-Mir-30-P2b Cfa-Mir-30-P2b Cja-Mir-30-P2b Cli-Mir-30-P2b Cmi-Mir-30-P2b Cpi-Mir-30-P2b Cpo-Mir-30-P2b Dno-Mir-30-P2b Dre-Mir-30-P2b Eca-Mir-30-P2b Ete-Mir-30-P2b Gga-Mir-30-P2b Gja-Mir-30-P2b Gmo-Mir-30-P2b Hsa-Mir-30-P2b Laf-Mir-30-P2b Lch-Mir-30-P2b Loc-Mir-30-P2b Mal-Mir-30-P2b Mdo-Mir-30-P2b Mml-Mir-30-P2b Mmr-Mir-30-P2b Mmu-Mir-30-P2b Mun-Mir-30-P2b Oan-Mir-30-P2b Ocu-Mir-30-P2b Pab-Mir-30-P2b Pbv-Mir-30-P2b Rno-Mir-30-P2b Sha-Mir-30-P2b Spt-Mir-30-P2b Sto-Mir-30-P2b Tgu-Mir-30-P2b Tni-Mir-30-P2b Xla-Mir-30-P2b1 Xla-Mir-30-P2b2 Xtr-Mir-30-P2b |
Node of Origin (locus) | Gnathostomata |
Node of Origin (family) | Vertebrata |
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051814.1: 140404557-140404618 [-] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | CCAUUUUGGAGAAUACUGAGUGACAGAUAUUGUAAACAUCCUACACUCUCAGCUGUGGAAAGUCAGAAAGCUGGGAGAAGGCUGUUUACUCUGUCUGCCUUGGAAAUCAGCUGAAAAGAAGAGet precursor sequence |
Structure | 10 20 30 40 50 60 CCAUUUUGGAGAAUACU----| UGA UU U ACA GUGGAA GAG CAGAUA GUAAACA CCU CUCUCAGCU A UUC GUCUGU CAUUUGU GGA GAGGGUCGA G AGAAGAAAAGUCGACUAAAGG^ C-- CU C A-- AAGACU 120 110 100 90 80 70 |
Deep sequencing | |
3' NTU | No |
Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
Mature sequence | Neu-Mir-30-P2b_5p |
mirBase accession | None |
Sequence |
0- UGUAAACAUCCUACACUCUCAGCU -24
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|
Co-mature sequence | Neu-Mir-30-P2b_3p |
mirBase accession | None |
Sequence |
40- CUGGGAGAAGGCUGUUUACUCU -62
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|