MirGeneDB 3.0
34 microRNA genes with seed UGUGACC
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Agr-Mir-2001 None MIR-2001 UGUGACC None None JABBOT010000001.1 47796802 47796859 - Bilateria Bilateria Unknown 1
Cbr-Mir-2001 cbr-mir-360 MIR-2001 UGUGACC None MIMAT0001303 X 11259477 11259537 + Bilateria Bilateria No
Cel-Mir-2001 cel-mir-360 MIR-2001 UGUGACC MIMAT0015121 MIMAT0000702 chrX 5919174 5919235 + Bilateria Bilateria No
Csc-Mir-2001 None MIR-2001 UGUGACC None None NW_019384413.1 874212 874272 + Bilateria Bilateria No 1
Dgr-Mir-2001 None MIR-2001 UGUGACC None None CAJFCJ010000027.1 591034 591101 - Bilateria Bilateria Unknown 1
Eba-Mir-2001 None MIR-2001 UGUGACC None None WURV02156569.1 3460 3519 + Bilateria Bilateria Unknown 1
Gsa-Mir-2001 gsa-mir-2001 MIR-2001 UGUGACC MIMAT0035280 MIMAT0035281 scf7180006951744 4739 4810 + Bilateria Bilateria No 1
Hmi-Mir-2001 None MIR-2001 UGUGACC None None SCFE01000006.1 3184949 3184999 + Bilateria Bilateria Unknown
Hru-Mir-2001 None MIR-2001 UGUGACC None None JALGQA010000012.1 1918026 1918084 - Bilateria Bilateria Unknown 1 1
Isc-Mir-2001 isc-mir-2001 MIR-2001 UGUGACC MIMAT0009721 None NW_024609884.1 42500086 42500147 + Bilateria Bilateria No 1
Lgi-Mir-2001 lgi-mir-2001 MIR-2001 UGUGACC MIMAT0009731 None LOTGIsca_150 486301 486357 - Bilateria Bilateria Unknown 1
Lhy-Mir-2001 None MIR-2001 UGUGACC None None scaffold54055_14.9 1899 1958 - Bilateria Bilateria Unknown 1
Llo-Mir-2001 None MIR-2001 UGUGACC None None OU342997.1 3150196 3150254 + Bilateria Bilateria Unknown
Lpo-Mir-2001 None MIR-2001 UGUGACC None None NW_013667319.1 181922 181978 - Bilateria Bilateria No 1
Mom-Mir-2001 None MIR-2001 UGUGACC None None JARFOD010132739.1 22313 22372 + Bilateria Bilateria Unknown
Npo-Mir-2001 None MIR-2001 UGUGACC None None JACATO010000601.1 22889 22948 + Bilateria Bilateria Unknown 1 1
Ofu-Mir-2001 None MIR-2001 UGUGACC None None CAIIXF020000005.1 14833615 14833672 - Bilateria Bilateria No 1
Pau-Mir-2001 None MIR-2001 UGUGACC None None NMRA01000092.1 873567 873625 + Bilateria Bilateria Unknown 1
Pcr-Mir-2001 None MIR-2001 UGUGACC None None CAJQUW010000533.1 454272 454327 - Bilateria Bilateria No 1
Pdu-Mir-2001 None MIR-2001 UGUGACC None None JAPTHN010000005.1 66483700 66483753 - Bilateria Bilateria No 1 1
Pfl-Mir-2001 None MIR-2001 UGUGACC None None LD368470.1 38645 38714 + Bilateria Bilateria No 1 1
Pmi-Mir-2001 pmi-mir-2001 MIR-2001 UGUGACC MIMAT0032175 None JH782853.1 10000 10059 - Bilateria Bilateria No 1 1
Pve-Mir-2001 None MIR-2001 UGUGACC None None CM062295.1:529343410-529343668 101 159 + Bilateria Bilateria Unknown 1 1
Sko-Mir-2001 sko-mir-2001 MIR-2001 UGUGACC MIMAT0009735 None NW_003126934.1 20664 20731 - Bilateria Bilateria Unknown 1
Snu-Mir-2001 None MIR-2001 UGUGACC None None CM049306.1 13254413 13254471 - Bilateria Bilateria Unknown 1 1
Spu-Mir-2001 spu-mir-2001 MIR-2001 UGUGACC MIMAT0009740 None AAGJ06000015.1 468208 468268 + Bilateria Bilateria No 1
Sro-Mir-2001 None MIR-2001 UGUGACC None None JANVAR010000765.1 132488 132565 - Bilateria Bilateria No
Tur-Mir-2001 None MIR-2001 UGUGACC None None HE587309.1 1324887 1324960 + Bilateria Bilateria No 1
War-Mir-2001 None MIR-2001 UGUGACC None None WNLI01179893.1 684 742 - Bilateria Bilateria Unknown 1 1
Xbo-Mir-2001 None MIR-2001 UGUGACC None None scaffold836 44083 44141 - Bilateria Bilateria No
Cte-Mir-2001-v1 cte-mir-2001 MIR-2001 UGUGACC MIMAT0009705 None CAPTEscaffold_296 188020 188081 + Bilateria Bilateria No 1
Dlo-Mir-2001-v2 None MIR-2001 UGUGACC None None NC_087225.1 53365 53420 + Bilateria Bilateria Unknown 1
Lan-Mir-2001-P3 None MIR-2001 UGUGACC None None LFEI01000174 377902 377960 + L. anatina Bilateria Unknown 1
Lan-Mir-2001-P4 None MIR-2001 UGUGACC None None LFEI01000195 453230 453288 - L. anatina Bilateria Unknown 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all