MirGeneDB 3.0
MirGeneDB ID

Agr-Mir-2001

Family name MIR-2001 (all species)
Seed UGUGACC
Species West Indian fuzzy chiton (Acanthopleura granulata )
MiRBase ID
Paralogues
Orthologues Bge-Mir-2001-P1  Bge-Mir-2001-P2  Cbr-Mir-2001  Cel-Mir-2001  Csc-Mir-2001  Cte-Mir-2001-v1  Cte-Mir-2001-v2  Dan-Mir-2001  Dgr-Mir-2001  Dlo-Mir-2001-v1  Dlo-Mir-2001-v2  Dme-Mir-2001  Dmo-Mir-2001  Dsi-Mir-2001  Dya-Mir-2001  Eba-Mir-2001  Gpa-Mir-2001  Gsa-Mir-2001  Hme-Mir-2001  Hmi-Mir-2001  Hru-Mir-2001  Isc-Mir-2001  Lan-Mir-2001-P3  Lan-Mir-2001-P4  Lgi-Mir-2001  Lhy-Mir-2001  Llo-Mir-2001  Lpo-Mir-2001  Mgi-Mir-2001  Mom-Mir-2001  Npo-Mir-2001  Ofu-Mir-2001  Pau-Mir-2001  Pcr-Mir-2001  Pdu-Mir-2001  Pfl-Mir-2001  Pmi-Mir-2001  Pve-Mir-2001  Rph-Mir-2001  Sko-Mir-2001  Snu-Mir-2001  Spu-Mir-2001  Sro-Mir-2001  Tur-Mir-2001  War-Mir-2001  Xbo-Mir-2001 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCA_016165875.1_ASM1616587v1_Acanthopleura_granula)		 JABBOT010000001.1: 47796802-47796859 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AGAAUGCAUGCUGAUUUUGCACCUAUACCAUUGUGACCGUUAUAAUGGGCAUAUGACAUAUAGAAUGUCCUUUACAACGUGCACAAUAGUACAGACAGCUUCUGACGUCUUCGGACUU
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Structure
        10         20         30        40        50        
AGAAUGCAUGCUGAUUUU-  AC-| A   C      AC    A   U      AUGAC 
                   GC   CU UAC AUUGUG  CGUU UAA GGGCAU     A
                   CG   GA AUG UAACAC  GCAA AUU CCUGUA     U
UUCAGGCUUCUGCAGUCUU  ACA^ C   A      GU    C   U      AGAUA 
      110       100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
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To
Mature sequence

Agr-Mir-2001_5p
mirBase accessionNone
Sequence 
0- UUGUGACCGUUAUAAUGGGCAU -22
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Star sequence

Agr-Mir-2001_3p* (predicted)
mirBase accessionNone
Sequence 
36- GUCCUUUACAACGUGCACAAUA -58
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