MirGeneDB 3.0
MirGeneDB ID

Dlo-Mir-2001-v1

Family name MIR-2001 (all species)
Seed UUGUGAC
Species Braconid wasp (Diachasmimorpha longicaudata)
MiRBase ID
Paralogues Dlo-Mir-2001-v2 
Orthologues Agr-Mir-2001  Cbr-Mir-2001  Cel-Mir-2001  Csc-Mir-2001  Cte-Mir-2001-v1  Dan-Mir-2001  Dgr-Mir-2001  Dme-Mir-2001  Dmo-Mir-2001  Dsi-Mir-2001  Dya-Mir-2001  Eba-Mir-2001  Gpa-Mir-2001  Gsa-Mir-2001  Hme-Mir-2001  Hmi-Mir-2001  Hru-Mir-2001  Isc-Mir-2001  Lgi-Mir-2001  Lhy-Mir-2001  Llo-Mir-2001  Lpo-Mir-2001  Mgi-Mir-2001  Mom-Mir-2001  Npo-Mir-2001  Ofu-Mir-2001  Pau-Mir-2001  Pcr-Mir-2001  Pdu-Mir-2001  Pfl-Mir-2001  Pmi-Mir-2001  Pve-Mir-2001  Rph-Mir-2001  Sko-Mir-2001  Snu-Mir-2001  Spu-Mir-2001  Sro-Mir-2001  Tur-Mir-2001  War-Mir-2001  Xbo-Mir-2001 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCF_034640455.1_iyDiaLong2_genomic)		 NC_087225.1: 53364-53421 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAUGAGUCAGGAAUUUUGGAGCUGUUUCGAUUUGUGACCGCAAUAAUGGGCGAUGAUUUAGAAGCGCUCGUUGAUGUGUUCACAAGUUGAACCUGCGGUUUUCCAACGUUUCUAUCGA
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Structure
        10        20           30        40        50        
AAUGAGUCAGGAAUUUUGG      ---|           C    A         AUGAU 
                   AGCUGU   UUCGAUUUGUGA CGCA UAAUGGGCG     U
                   UUGGCG   AAGUUGAACACU GUGU GUUGCUCGC     U
AGCUAUCUUUGCAACCUU-      UCC^           U    A         GAAGA 
      110        100        90        80        70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Sr Sr
Mature sequence

Dlo-Mir-2001-v1_5p
mirBase accessionNone
Sequence 
0- UUUGUGACCGCAAUAAUGGGCG -22
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Star sequence

Dlo-Mir-2001-v1_3p* (predicted)
mirBase accessionNone
Sequence 
36- CUCGUUGAUGUGUUCACAAGUU -58
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