MirGeneDB ID | Dgr-Mir-2001 |
---|---|
Family name | MIR-2001 (all species) |
Seed | UGUGACC |
Species | Dimorphilus gyrociliatus (Dimorphilus gyrociliatus) |
MiRBase ID | |
Paralogues | |
Orthologues | Agr-Mir-2001 Bge-Mir-2001-P1 Bge-Mir-2001-P2 Cbr-Mir-2001 Cel-Mir-2001 Csc-Mir-2001 Cte-Mir-2001-v1 Cte-Mir-2001-v2 Dan-Mir-2001 Dlo-Mir-2001-v1 Dlo-Mir-2001-v2 Dme-Mir-2001 Dmo-Mir-2001 Dsi-Mir-2001 Dya-Mir-2001 Eba-Mir-2001 Gpa-Mir-2001 Gsa-Mir-2001 Hme-Mir-2001 Hmi-Mir-2001 Hru-Mir-2001 Isc-Mir-2001 Lan-Mir-2001-P3 Lan-Mir-2001-P4 Lgi-Mir-2001 Lhy-Mir-2001 Llo-Mir-2001 Lpo-Mir-2001 Mgi-Mir-2001 Mom-Mir-2001 Npo-Mir-2001 Ofu-Mir-2001 Pau-Mir-2001 Pcr-Mir-2001 Pdu-Mir-2001 Pfl-Mir-2001 Pmi-Mir-2001 Pve-Mir-2001 Rph-Mir-2001 Sko-Mir-2001 Snu-Mir-2001 Spu-Mir-2001 Sro-Mir-2001 Tur-Mir-2001 War-Mir-2001 Xbo-Mir-2001 |
Node of Origin (locus) | Bilateria |
Node of Origin (family) | Bilateria |
Genome context (GCA_904063045.1_Dgyrociliatus) |
CAJFCJ010000027.1: 591034-591101 [-] |
Precursor (pre-Mir +30nt flank) | AACUGAACUUGAAACAUUUCAUUGGCCAACUUGUGACCGUUAUAAUGGGCAUUAACUGCUUAAAAAUAUGCGAAAUGUCCCUUGUAGCGUUCUCAAUUUGGACAACGAAAAUACUCAUCAAUAUAAAAGet precursor sequence |
Structure | 10 20 30 40 50 60 AACUGAACUUGAAACAU--| A G C U C U UUAACUGCUUA UUC UUG CCAA UUG GA CGUUAUAA GGGCA A AAG AAC GGUU AAC CU GCGAUGUU CCUGU A AAAAUAUAACUACUCAUAA^ C A U U U C AAAGCGUAUAA 120 110 100 90 80 70 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | CNNC at 3p(+17) |
Mature sequence | Dgr-Mir-2001_5p (predicted) |
mirBase accession | None |
Sequence |
0- UUGUGACCGUUAUAAUGGGCA -21
Get sequence
|
Star sequence | Dgr-Mir-2001_3p* (predicted) |
mirBase accession | None |
Sequence |
47- UCCCUUGUAGCGUUCUCAAUU -68
Get sequence
|