MirGeneDB 2.1
MirGeneDB ID

Xbo-Mir-2001

Family name MIR-2001 (all species)
Seed UGUGACC
Species Xenoturbella (Xenoturbella bocki)
MiRBase ID
Paralogues
Orthologues Bge-Mir-2001-P1  Bge-Mir-2001-P2  Cbr-Mir-2001  Cel-Mir-2001  Cgi-Mir-2001  Csc-Mir-2001  Cte-Mir-2001  Dan-Mir-2001  Dme-Mir-2001  Dmo-Mir-2001  Dsi-Mir-2001  Dya-Mir-2001  Hme-Mir-2001  Isc-Mir-2001  Lan-Mir-2001-P3  Lan-Mir-2001-P4  Lgi-Mir-2001  Lpo-Mir-2001  Npo-Mir-2001  Pfl-Mir-2001  Pmi-Mir-2001  Sko-Mir-2001  Spu-Mir-2001 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Xbocki_plus)		 3C-assembly_contig_1901: 5658518-5658576 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAUUCUAGCAGUUGUUUACUGUGUACAUAGUUGUGACCGUUAUAAUGGGCAUUUCACAUCAGAGCAAUGCUCAUUGAACAGUCGCAACCCAGUACAGCAGUCGUGUGCUUUUGGAUCGG
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Structure
        10         20         30        40        50         
UAUUCUAGCAGUUGUUU-    -|    AUA        C   A           UCACA 
                  ACUG UGUAC   GUUGUGAC GUU UAAUGGGCAUU     U
                  UGAC ACAUG   CAACGCUG CAA GUUACUCGUAA     C
GGCUAGGUUUUCGUGUGC    G^    ACC        A   -           CGAGA 
       110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
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Mature sequence

Xbo-Mir-2001_5p
mirBase accessionNone
Sequence 
0- UUGUGACCGUUAUAAUGGGCAUU -23
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Star sequence

Xbo-Mir-2001_3p*
mirBase accessionNone
Sequence 
37- UGCUCAUUGAACAGUCGCAACC -59
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