Mir
Gene
DB
2.1
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80 microRNA genes with seed AGCUGCC
Sort by genome coordinates
Motifs
MirGeneDB ID
MiRBase ID
Family
Seed
5p accession
3p accession
Chromosome
Start
End
Strand
Node of origin (locus)
Node of origin (family)
3' NTU
▲
UG
UGUG
CNNC
Sme-Mir-2159
sme-mir-2159
MIR-2159
GCCUUUU
MIMAT0011252
MIMAT0012150
NNSW01000024_dd_Smes_g4_24
706635
706691
-
S. mediterranea
S. mediterranea
No
Bfl-Mir-22-P1
bfl-mir-22
MIR-22
AGCUGCC
MIMAT0019138
MIMAT0009470
NC_049989.1
18881875
18881932
-
Bilateria
Bilateria
No
1
Bla-Mir-22-P1
None
MIR-22
AGCUGCC
None
None
Sc0000015
676729
676786
+
Bilateria
Bilateria
No
1
Dmo-Mir-22-P2
None
MIR-22
AGCUGCC
None
None
scaffold_6473
11075574
11075640
+
Bilateria
Bilateria
No
1
1
Cgi-Mir-22-P2
None
MIR-22
AGCUGCC
None
None
scaffold726
81942
82005
-
Bilateria
Bilateria
No
1
Aae-Mir-22-P2
aae-mir-980
MIR-22
AGCUGCC
MIMAT0014235
MIMAT0014236
supercont1.23
1043029
1043091
+
Bilateria
Bilateria
No
Hme-Mir-22-P2
hme-mir-745
MIR-22
AGCUGCC
None
MIMAT0024986
HE671337
442728
442786
-
Bilateria
Bilateria
No
1
Esc-Mir-22-P2
None
MIR-22
AGCUGCC
None
None
Esc-Mir-22-P2_pre_SRIE01053230.1:87064-87319
101
156
+
Bilateria
Bilateria
No
1
1
Bge-Mir-22-P2
None
MIR-22
AGCUGCC
None
None
KZ616253.1
43902
43964
+
Bilateria
Bilateria
No
1
1
Ovu-Mir-22-P2
None
MIR-22
AGCUGCC
None
None
RXHP01036531.1
27585
27641
-
Bilateria
Bilateria
No
1
1
Dpu-Mir-22-P2
dpu-mir-745
MIR-22
GGUCCUU
None
MIMAT0012646
DAPPUscaffold_63
361996
362061
-
Bilateria
Bilateria
No
1
Lan-Mir-22-P2
None
MIR-22
AGCUGCC
None
None
LFEI01000044
311763
311822
+
Bilateria
Bilateria
No
Isc-Mir-22-P2
None
MIR-22
AGCUGCC
None
None
DS740244
10264
10324
+
Bilateria
Bilateria
No
1
Cel-Mir-22-P2
cel-mir-1822
MIR-22
AGCUGCC
MIMAT0015266
MIMAT0006589
chrII
6015552
6015612
+
Bilateria
Bilateria
No
Dme-Mir-22-P2
dme-mir-980
MIR-22
AGCUGCC
MIMAT0020877
MIMAT0005496
X
280188
280254
-
Bilateria
Bilateria
No
1
Asu-Mir-22-P2
asu-mir-1822
MIR-22
AGCUGCC
MIMAT0021535
MIMAT0021536
Scaffold1417
35061
35121
-
Bilateria
Bilateria
No
1
1
Dsi-Mir-22-P2
dsi-mir-980
MIR-22
AGCUGCC
MIMAT0012481
MIMAT0012482
X
113167
113233
-
Bilateria
Bilateria
No
1
Cte-Mir-22-P2
cte-mir-745b
MIR-22
AGCUGCC
None
MIMAT0009546
CAPTEscaffold_133
228627
228683
+
Bilateria
Bilateria
No
1
Dya-Mir-22-P2
None
MIR-22
AGCUGCC
None
None
X
117086
117152
-
Bilateria
Bilateria
No
1
Dan-Mir-22-P2
None
MIR-22
AGCUGCC
None
None
scaffold_13117
4815211
4815276
-
Bilateria
Bilateria
No
1
Lgi-Mir-22-P2
lgi-mir-745b
MIR-22
AGCUGCC
None
MIMAT0009599
LOTGIsca_20
382169
382227
+
Bilateria
Bilateria
No
1
Lpo-Mir-22-P2d
None
MIR-22
AGCUGCC
None
None
NW_013666234.1
297414
297471
+
L. polyphemus
Bilateria
No
1
Bfl-Mir-22-o3d
bfl-mir-4900b-1
MIR-22
AGCUGCC
None
MIMAT0020493
NC_049989.1
18866452
18866510
-
B. floridae
Bilateria
No
1
Sto-Mir-22-P1a
None
MIR-22
AGCUGCC
None
None
BFAA01002408.1
121892
121951
+
Vertebrata
Bilateria
No
Cmi-Mir-22-P1a
None
MIR-22
AGCUGCC
None
None
KI636069.1
354886
354945
+
Vertebrata
Bilateria
No
1
1
Tni-Mir-22-P1a
tni-mir-22b
MIR-22
AGCUGCC
None
MIMAT0003046
12
6138920
6138983
+
Vertebrata
Bilateria
No
1
1
Gmo-Mir-22-P1a
gmo-mir-22b
MIR-22
AGCUGCC
MIMAT0044037
MIMAT0044038
contig364380
190
249
+
Vertebrata
Bilateria
No
1
Mal-Mir-22-P1a
None
MIR-22
AGCUGCC
None
None
KV884711.1
3584290
3584352
+
Vertebrata
Bilateria
No
1
1
Dre-Mir-22-P1a
dre-mir-22b
MIR-22
AGCUGCC
MIMAT0031943
MIMAT0001789
chr5
12610815
12610873
+
Vertebrata
Bilateria
No
1
1
Loc-Mir-22-P1a
None
MIR-22
AGCUGCC
None
None
LG20
5528215
5528274
+
Vertebrata
Bilateria
No
1
Lpo-Mir-22-P2a
None
MIR-22
AGCUGCC
None
None
NW_013670121.1
15031
15088
-
L. polyphemus
Bilateria
No
1
Tgu-Mir-22-P1b
None
MIR-22
AGCUGCC
None
None
19
4804172
4804234
+
Vertebrata
Bilateria
No
1
1
Sto-Mir-22-P1b
None
MIR-22
AGCUGCC
None
None
BFAA01000512.1
189391
189453
+
Vertebrata
Bilateria
No
1
1
Hsa-Mir-22-P1b
hsa-mir-22
MIR-22
AGCUGCC
MIMAT0004495
MIMAT0000077
chr17
1713914
1713973
-
Vertebrata
Bilateria
No
1
1
Ami-Mir-22-P1b
None
MIR-22
AGCUGCC
None
None
NW_017708683.1
31
90
+
Vertebrata
Bilateria
No
1
Cmi-Mir-22-P1b
None
MIR-22
AGCUGCC
None
None
KI635901.1
4512697
4512759
+
Vertebrata
Bilateria
No
1
1
Mml-Mir-22-P1b
mml-mir-22
MIR-22
AGCUGCC
None
MIMAT0002330
chr16
1602993
1603052
-
Vertebrata
Bilateria
No
1
1
Cpi-Mir-22-P1b
cpi-mir-22
MIR-22
AGCUGCC
MIMAT0037653
MIMAT0037654
JH584690
8378147
8378209
+
Vertebrata
Bilateria
No
1
Mmu-Mir-22-P1b
mmu-mir-22
MIR-22
AGCUGCC
MIMAT0004629
MIMAT0000531
chr11
75463734
75463793
+
Vertebrata
Bilateria
No
1
1
Aca-Mir-22-P1b
None
MIR-22
AGCUGCC
None
None
SRR150218727584143
38
101
+
Vertebrata
Bilateria
No
1
Rno-Mir-22-P1b
rno-mir-22
MIR-22
AGCUGCC
MIMAT0003152
MIMAT0000791
chr10
62299610
62299669
+
Vertebrata
Bilateria
No
1
1
Pbv-Mir-22-P1b
pbv-mir-22
MIR-22
AGCUGCC
MIMAT0038851
MIMAT0038852
KE957638.1
96463
96524
-
Vertebrata
Bilateria
No
1
Cpo-Mir-22-P1b
cpo-mir-22
MIR-22
AGCUGCC
MIMAT0046874
MIMAT0046875
scaffold_32
20705576
20705635
+
Vertebrata
Bilateria
No
1
1
Gja-Mir-22-P1b
None
MIR-22
AGCUGCC
None
None
NW_015173122.1
916413
916474
-
Vertebrata
Bilateria
No
1
1
Ocu-Mir-22-P1b
ocu-mir-22
MIR-22
AGCUGCC
MIMAT0048126
MIMAT0048127
chr19
16435658
16435717
+
Vertebrata
Bilateria
No
1
1
Cfa-Mir-22-P1b
cfa-mir-22
MIR-22
AGCUGCC
None
MIMAT0006733
chr9
45852534
45852593
-
Vertebrata
Bilateria
No
1
1
Bta-Mir-22-P1b
bta-mir-22
MIR-22
AGCUGCC
MIMAT0003826
MIMAT0012536
NC_037346.1
22811579
22811638
-
Vertebrata
Bilateria
No
1
1
Xtr-Mir-22-P1b
xtr-mir-22
MIR-22
AGCUGCC
MIMAT0003671
MIMAT0003672
chr2
40225984
40226045
+
Vertebrata
Bilateria
No
1
1
Dno-Mir-22-P1b
dno-mir-22
MIR-22
AGCUGCC
MIMAT0047526
MIMAT0047527
JH582994
772340
772399
+
Vertebrata
Bilateria
No
1
1
Mun-Mir-22-P1b
None
MIR-22
AGCUGCC
None
None
22-P1b_LR594644.1:62098098-62098359
101
162
+
Vertebrata
Bilateria
No
1
1
Ete-Mir-22-P1b
None
MIR-22
AGCUGCC
None
None
JH980319
1672640
1672699
+
Vertebrata
Bilateria
No
1
1
Sha-Mir-22-P1b
None
MIR-22
AGCUGCC
None
None
AFEY01011013_Mir-22-P1a
1533
1592
+
Vertebrata
Bilateria
No
1
1
Mdo-Mir-22-P1b
mdo-mir-22
MIR-22
AGCUGCC
MIMAT0026651
MIMAT0004092
2
517205534
517205593
-
Vertebrata
Bilateria
No
1
1
Oan-Mir-22-P1b
oan-mir-22
MIR-22
AGCUGCC
MIMAT0006961
MIMAT0006962
NC_041744.1
5697962
5698021
+
Vertebrata
Bilateria
No
1
Gga-Mir-22-P1b
gga-mir-22
MIR-22
AGCUGCC
MIMAT0007287
MIMAT0007288
19
5528034
5528096
-
Vertebrata
Bilateria
No
1
1
Cli-Mir-22-P1b
cli-mir-22
MIR-22
AGCUGCC
MIMAT0038438
MIMAT0038439
scaffold94
2621552
2621614
-
Vertebrata
Bilateria
No
1
1
Loc-Mir-22-P1b
None
MIR-22
AGCUGCC
None
None
LG22
6256492
6256554
+
Vertebrata
Bilateria
No
1
1
Lpo-Mir-22-P2b
None
MIR-22
AGCUGCC
None
None
NW_013668767.1
26063
26120
-
L. polyphemus
Bilateria
No
1
Tni-Mir-22-P1b1
tni-mir-22a
MIR-22
AGCUGCC
None
MIMAT0003100
10
10460516
10460578
+
Clupeocephala
Bilateria
No
1
1
Gmo-Mir-22-P1b1
gmo-mir-22a-1
MIR-22
AGCUGCC
MIMAT0044131
MIMAT0044132
GeneScaffold_1627
222059
222120
-
Clupeocephala
Bilateria
No
1
1
Mal-Mir-22-P1b1
None
MIR-22
AGCUGCC
None
None
KV884733.1
910104
910166
+
Clupeocephala
Bilateria
No
1
1
Dre-Mir-22-P1b1
dre-mir-22a
MIR-22
AGCUGCC
MIMAT0031942
MIMAT0001788
chr15
24908404
24908466
-
Clupeocephala
Bilateria
No
1
Tni-Mir-22-P1b2
None
MIR-22
AGCUGCC
None
None
7
8307611
8307673
-
Clupeocephala
Bilateria
No
1
Gmo-Mir-22-P1b2
gmo-mir-22a-2
MIR-22
AGCUGCC
MIMAT0044276
MIMAT0044132
GeneScaffold_4258
86653
86715
-
Clupeocephala
Bilateria
No
1
Mal-Mir-22-P1b2
None
MIR-22
AGCUGCC
None
None
KV884887.1
86444
86506
-
Clupeocephala
Bilateria
No
1
Dre-Mir-22-P1b2
None
MIR-22
AGCUGCC
None
None
chr21
39267231
39267293
-
Clupeocephala
Bilateria
No
1
Xla-Mir-22-P1b3
None
MIR-22
GUUCUUC
None
None
NC_030726.1
44743948
44744009
+
X. laevis
Bilateria
No
1
1
Xla-Mir-22-P1b4
xla-mir-22
MIR-22
GUUCUUC
MIMAT0046540
MIMAT0046541
NC_030727.1
33649106
33649167
-
X. laevis
Bilateria
No
1
1
Lpo-Mir-22-P2c
None
MIR-22
AGCUGCC
None
None
NW_013666188.1
65508
65566
-
L. polyphemus
Bilateria
No
1
Ebu-Mir-22-P1o1
None
MIR-22
AGCUGCC
None
None
FYBX02010605.1
939050
939111
+
E. burgeri
Bilateria
No
1
Pma-Mir-22-P1o2
pma-mir-22b
MIR-22
AGCUGCC
MIMAT0019400
MIMAT0019401
NC_046106.1
10906046
10906112
-
P. marinus
Bilateria
No
1
Pma-Mir-22-P1o3
pma-mir-22a
MIR-22
AGCUGCC
MIMAT0019398
MIMAT0019399
NC_046073.1
16942602
16942664
-
P. marinus
Bilateria
No
1
Tca-Mir-22-P2-v1
tca-mir-980
MIR-22
GGCUCGU
MIMAT0018864
MIMAT0018865
KQ972119
1428
1488
+
Bilateria
Bilateria
No
1
1
Cbr-Mir-22-P2-v1
cbr-mir-1822
MIR-22
AGCUGCC
None
MIMAT0011481
II
9704350
9704413
-
Bilateria
Bilateria
No
Pfl-Mir-22-P1
None
MIR-22
AGCUGCC
None
None
LD346721.1
581033
581090
-
Bilateria
Bilateria
Unknown
1
Npo-Mir-22-P2
None
MIR-22
AGCUGCC
None
None
JACATO010000578.1
916031
916089
+
Bilateria
Bilateria
Unknown
Csc-Mir-22-P2
None
MIR-22
AGCUGCC
None
None
NW_019384373.1
323358
323414
+
Bilateria
Bilateria
Unknown
1
1
1
Lch-Mir-22-P1a
None
MIR-22
AGCUGCC
None
None
JH126621.1
2124056
2124115
-
Vertebrata
Bilateria
Unknown
Spt-Mir-22-P1b
None
MIR-22
AGCUGCC
None
None
QEPC01008384.1
3512951
3513012
+
Vertebrata
Bilateria
Unknown
1
1
Lch-Mir-22-P1b
None
MIR-22
AGCUGCC
None
None
JH127856.1
309481
309543
+
Vertebrata
Bilateria
Unknown
1
1
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