MirGeneDB 3.0
MirGeneDB ID

Cpi-Mir-218-P4

Family name MIR-218 (all species)
Seed UGUGCUU
Species Western painted turtle (Chrysemys picta bellii)
MiRBase ID cpi-mir-218-2
Paralogues Cpi-Mir-218-P2 
Orthologues Aca-Mir-218-P4  Ami-Mir-218-P4  Bta-Mir-218-P4  Cfa-Mir-218-P4  Cja-Mir-218-P4  Cli-Mir-218-P4  Cmi-Mir-218-P4  Cpo-Mir-218-P4  Dno-Mir-218-P4  Dre-Mir-218-P4-v1  Dre-Mir-218-P4-v2  Eca-Mir-218-P4  Ete-Mir-218-P4  Gga-Mir-218-P4  Gja-Mir-218-P4  Gmo-Mir-218-P4  Hsa-Mir-218-P4  Laf-Mir-218-P4  Lch-Mir-218-P4  Loc-Mir-218-P4  Mal-Mir-218-P4  Mdo-Mir-218-P4  Mml-Mir-218-P4  Mmr-Mir-218-P4  Mmu-Mir-218-P4  Oan-Mir-218-P4  Ocu-Mir-218-P4  Pab-Mir-218-P4  Pbv-Mir-218-P4  Rno-Mir-218-P4  Sha-Mir-218-P4  Spt-Mir-218-P4  Sto-Mir-218-P4  Tgu-Mir-218-P4  Tni-Mir-218-P4  Xla-Mir-218-P4a  Xla-Mir-218-P4b  Xtr-Mir-218-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(chrPic1)		 JH584664: 1595320-1595383 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACUGACUCUGACUGUUAAUGGGGUUUUCCUUUGUGCUUGAUCUAACCAUGUGGUAGAACAAUACAAAUUGAACAUGGUUCUGUCAAGCACCAUGGAAGGCUGCAUACUUUCCUGCCGCAUGGCA
Get precursor sequence
Structure
        10          20        30        40        50        60 
ACUGACUCUGACUGUUA--|  G        UUU         CU        GGUAGAACA 
                   AUG GGUUUUCC   GUGCUUGAU  AACCAUGU         A
                   UAC UCGGAAGG   CACGAACUG  UUGGUACA         U
ACGGUACGCCGUCCUUUCA^  G        UAC         UC        AGUUAAACA 
  120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Te Te Te To
Mature sequence

Cpi-Mir-218-P4_5p
mirBase accessionMIMAT0037846
Sequence 
0- UUGUGCUUGAUCUAACCAUGU -21
Get sequence
Star sequence

Cpi-Mir-218-P4_3p* (predicted)
mirBase accessionMIMAT0037847
Sequence 
43- AUGGUUCUGUCAAGCACCAUG -64
Get sequence