MirGeneDB 2.1
MirGeneDB ID

Sto-Mir-218-P4

Family name MIR-218 (all species)
Seed UGUGCUU
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues Sto-Mir-218-P2 
Orthologues Aca-Mir-218-P4  Ami-Mir-218-P4  Bta-Mir-218-P4  Cfa-Mir-218-P4  Cli-Mir-218-P4  Cmi-Mir-218-P4  Cpi-Mir-218-P4  Cpo-Mir-218-P4  Dno-Mir-218-P4  Dre-Mir-218-P4-v1  Dre-Mir-218-P4-v2  Ete-Mir-218-P4  Gga-Mir-218-P4  Gja-Mir-218-P4  Gmo-Mir-218-P4  Hsa-Mir-218-P4  Lch-Mir-218-P4  Loc-Mir-218-P4  Mal-Mir-218-P4  Mdo-Mir-218-P4  Mml-Mir-218-P4  Mmu-Mir-218-P4  Oan-Mir-218-P4  Ocu-Mir-218-P4  Pbv-Mir-218-P4  Rno-Mir-218-P4  Sha-Mir-218-P4  Spt-Mir-218-P4  Tgu-Mir-218-P4  Tni-Mir-218-P4  Xla-Mir-218-P4a  Xla-Mir-218-P4b  Xtr-Mir-218-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01000179.1: 946998-947061 [+]
Precursor
(pre-Mir +30nt flank)
ACUGGCUCUGAUUCUAAGCGAGGUGUUCUGUUGUGCUUGAUCUAACCAUGUGGUUCCAAGCUAUGAGUAAAACAUGGUUUCGUCAAGCACCAUGGUACGCCUUGUGUCUUUCUGCAGCAUGUCA
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Structure
        10          20        30        40        50        60 
ACUGGCUCUGAUUCUAA--|        U    U         CU        GGUUCCAAG 
                   GCGAGGUGU CUGU GUGCUUGAU  AACCAUGU         C
                   UGUUCCGCA GGUA CACGAACUG  UUGGUACA         U
ACUGUACGACGUCUUUCUG^        U    C         CU        AAAUGAGUA 
  120       110       100        90        80        70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Sto-Mir-218-P4_5p
mirBase accessionNone
Sequence 
0- UUGUGCUUGAUCUAACCAUGUG -22
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Star sequence

Sto-Mir-218-P4_3p* (predicted)
mirBase accessionNone
Sequence 
42- CAUGGUUUCGUCAAGCACCAUG -64
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