MirGeneDB 3.0
MirGeneDB ID

Mdo-Mir-218-P4

Family name MIR-218 (all species)
Seed UGUGCUU
Species Gray short-tailed opossum (Monodelphis domestica)
MiRBase ID mdo-mir-218-2
Paralogues Mdo-Mir-218-P2 
Orthologues Aca-Mir-218-P4  Ami-Mir-218-P4  Bta-Mir-218-P4  Cfa-Mir-218-P4  Cja-Mir-218-P4  Cli-Mir-218-P4  Cmi-Mir-218-P4  Cpi-Mir-218-P4  Cpo-Mir-218-P4  Dno-Mir-218-P4  Dre-Mir-218-P4-v1  Dre-Mir-218-P4-v2  Eca-Mir-218-P4  Ete-Mir-218-P4  Gga-Mir-218-P4  Gja-Mir-218-P4  Gmo-Mir-218-P4  Hsa-Mir-218-P4  Laf-Mir-218-P4  Lch-Mir-218-P4  Loc-Mir-218-P4  Mal-Mir-218-P4  Mml-Mir-218-P4  Mmr-Mir-218-P4  Mmu-Mir-218-P4  Oan-Mir-218-P4  Ocu-Mir-218-P4  Pab-Mir-218-P4  Pbv-Mir-218-P4  Rno-Mir-218-P4  Sha-Mir-218-P4  Spt-Mir-218-P4  Sto-Mir-218-P4  Tgu-Mir-218-P4  Tni-Mir-218-P4  Xla-Mir-218-P4a  Xla-Mir-218-P4b  Xtr-Mir-218-P4 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(monDom5_add)		 1: 367287193-367287256 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUGACUCUGACUGGCCACGGGGCUUUCCUUUGUGCUUGAUCUAACCAUGUGGUGGAACGAUAGAAACAGAACAUGGUUCUGUCAAGCACCGCGGAAAGCUCCGUGCUUUUCUGCAGCAUGGCC
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Structure
        10          20        30        40        50        60 
CUUGACUCUGACUGGCC--|           UUU         CU        GGUGGAACG 
                   ACGGGGCUUUCC   GUGCUUGAU  AACCAUGU         A
                   UGCCUCGAAAGG   CACGAACUG  UUGGUACA         U
CCGGUACGACGUCUUUUCG^           CGC         UC        AGACAAAGA 
  120       110       100        90        80        70
Deep sequencing
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CommentThere are Dicer cuts +1 and +2.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Ce He Ki Te
Mature sequence

Mdo-Mir-218-P4_5p
mirBase accessionMIMAT0004133
Sequence 
0- UUGUGCUUGAUCUAACCAUGU -21
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Proposed targets TargetScanVert: mdo-miR-218-5p
Star sequence

Mdo-Mir-218-P4_3p*
mirBase accessionMIMAT0031111
Sequence 
43- AUGGUUCUGUCAAGCACCGCG -64
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Proposed targets TargetScanVert: mdo-miR-218-2-3p