| MirGeneDB ID | Mml-Mir-218-P4 |
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| Family name |
MIR-218 (all species) |
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| Seed |
UGUGCUU |
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| Species |
Rhesus monkey (Macaca mulatta) |
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| MiRBase ID |
mml-mir-218-2
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| Paralogues |
Mml-Mir-218-P2
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| Orthologues |
Aca-Mir-218-P4
Ami-Mir-218-P4
Bta-Mir-218-P4
Cfa-Mir-218-P4
Cja-Mir-218-P4
Cli-Mir-218-P4
Cmi-Mir-218-P4
Cpi-Mir-218-P4
Cpo-Mir-218-P4
Dno-Mir-218-P4
Dre-Mir-218-P4-v1
Dre-Mir-218-P4-v2
Eca-Mir-218-P4
Ete-Mir-218-P4
Gga-Mir-218-P4
Gja-Mir-218-P4
Gmo-Mir-218-P4
Hsa-Mir-218-P4
Laf-Mir-218-P4
Lch-Mir-218-P4
Loc-Mir-218-P4
Mal-Mir-218-P4
Mdo-Mir-218-P4
Mmr-Mir-218-P4
Mmu-Mir-218-P4
Oan-Mir-218-P4
Ocu-Mir-218-P4
Pab-Mir-218-P4
Pbv-Mir-218-P4
Rno-Mir-218-P4
Sha-Mir-218-P4
Spt-Mir-218-P4
Sto-Mir-218-P4
Tgu-Mir-218-P4
Tni-Mir-218-P4
Xla-Mir-218-P4a
Xla-Mir-218-P4b
Xtr-Mir-218-P4
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| Node of Origin (locus) |
Gnathostomata
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| Node of Origin (family) |
Vertebrata
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Genome context
(GCA_003339765.3_Mmul_10_traces) |
CM014341.1: 166169549-166169612 [-]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GACUCUGACCAGUCGCUGCGGGGCUUUCCUUUGUGCUUGAUCUAACCAUGUGGUGGAACGAUGGAAACGGAACAUGGUUCUGUCAAGCACCGCGGAAAGCACCGUGCUCUCCUGCAGCAUGGCC
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GACUCUGACCAGUCGCU--| G UUU CU GGUGGAACG
GCGG GCUUUCC GUGCUUGAU AACCAUGU A
UGCC CGAAAGG CACGAACUG UUGGUACA U
CCGGUACGACGUCCUCUCG^ A CGC UC AGGCAAAGG
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| Comment | There is a second Dicer cut +1 on both arms. |
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| 3' NTU |
No
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Bo |
Br |
Br |
Br |
He |
Ki |
Li |
Lu |
Ly |
Sk |
Sp |
Te |
Th |
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| Mature sequence |
Mml-Mir-218-P4_5p |
| mirBase accession | MIMAT0002574 |
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| Sequence |
0- UUGUGCUUGAUCUAACCAUGU -21
Get sequence
|
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| Proposed targets |
TargetScanVert: mml-miR-218-5p
|
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| Star sequence |
Mml-Mir-218-P4_3p* |
| mirBase accession | MIMAT0026589 |
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| Sequence |
43- AUGGUUCUGUCAAGCACCGCG -64
Get sequence
|
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| Proposed targets |
TargetScanVert: mml-miR-218-2-3p
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