MirGeneDB 3.0
MirGeneDB ID

Loc-Mir-92-P2c

Family name MIR-92 (all species)
Seed AUUGCAC
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues Loc-Mir-92-P1a  Loc-Mir-92-P1d  Loc-Mir-92-P2d 
Orthologues Aca-Mir-92-P2c  Ami-Mir-92-P2c  Asu-Mir-92  Bfl-Mir-92-o2  Bla-Mir-92-o2  Bta-Mir-92-P2c  Cel-Mir-92  Cfa-Mir-92-P2c  Cja-Mir-92-P2c  Cli-Mir-92-P2c  Cmi-Mir-92-P2c  Cpi-Mir-92-P2c  Cpo-Mir-92-P2c  Dno-Mir-92-P2c  Dre-Mir-92-P2c  Eca-Mir-92-P2c  Esc-Mir-92  Ete-Mir-92-P2c  Gga-Mir-92-P2c  Gja-Mir-92-P2c  Gmo-Mir-92-P2c  Gsp-Mir-92  Hmi-Mir-92  Hsa-Mir-92-P2c  Isc-Mir-92  Laf-Mir-92-P2c  Lch-Mir-92-P2c  Mdo-Mir-92-P2c  Mml-Mir-92-P2c  Mmr-Mir-92-P2c  Mmu-Mir-92-P2c  Mun-Mir-92-P2c  Neu-Mir-92-P2c  Oan-Mir-92-P2c  Obi-Mir-92  Ocu-Mir-92-P2c  Pab-Mir-92-P2c  Pbv-Mir-92-P2c  Rno-Mir-92-P2c  Sha-Mir-92-P2c  Sme-Mir-92  Spt-Mir-92-P2c  Sto-Mir-92-P2c  Tgu-Mir-92-P2c  Xla-Mir-92-P2c3  Xla-Mir-92-P2c4  Xtr-Mir-92-P2c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(LepOcu1)		 LG7: 45788477-45788542 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UGCUGGAGUUCGCCACUGUCUGGCUGUUUUCGGGUGGAUGACGUUGCAAUUUUAGCAAUCCUUUGGGGAAAAAAAAUUGCACGGUAUCCAUCUGUAAUCCGCCGGACACGCAGUUCGGGCAGAACU
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Structure
        10          20        30         40        50        60   
UGCUGGAGUUCGCCACU--|      U UU  -          A   U        AGCAAUCCU 
                   GUCUGGC G  UU CGGGUGGAUG CGU GCAAUUUU         \
                   CAGGCCG C  AA GUCUACCUAU GCA CGUUAAAA         U
UCAAGACGGGCUUGACGCA^      - CU  U          G   -        AAAAGGGGU 
    120       110        100        90         80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Star sequence

Loc-Mir-92-P2c_5p*
mirBase accessionNone
Sequence 
0- CGGGUGGAUGACGUUGCAAUUUU -23
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Mature sequence

Loc-Mir-92-P2c_3p
mirBase accessionNone
Sequence 
44- AAUUGCACGGUAUCCAUCUGUA -66
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