MirGeneDB 3.0
MirGeneDB ID

Mmr-Mir-130-P1c

Family name MIR-130 (all species)
Seed AGUGCAA
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID mmr-mir-130a
Paralogues Mmr-Mir-130-P2a  Mmr-Mir-130-P2b  Mmr-Mir-130-P4a 
Orthologues Aca-Mir-130-P1c  Ami-Mir-130-P1c  Bta-Mir-130-P1c  Cfa-Mir-130-P1c  Cja-Mir-130-P1c  Cpi-Mir-130-P1c  Cpo-Mir-130-P1c  Dno-Mir-130-P1c  Eca-Mir-130-P1c  Ete-Mir-130-P1c  Gja-Mir-130-P1c  Hsa-Mir-130-P1c  Laf-Mir-130-P1c  Lch-Mir-130-P1c  Mdo-Mir-130-P1c  Mml-Mir-130-P1c  Mmu-Mir-130-P1c  Mun-Mir-130-P1c  Neu-Mir-130-P1c  Oan-Mir-130-P1c  Ocu-Mir-130-P1c  Pab-Mir-130-P1c  Pbv-Mir-130-P1c  Rno-Mir-130-P1c  Sha-Mir-130-P1c  Spt-Mir-130-P1c  Sto-Mir-130-P1c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)		 CM007665.1: 2001838-2001899 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGGGUCGGCAUGCCUCUGCUGCUGGCCAGAGCUCUUUUCACAUUGUGCUACUGUCUGCACCUGUCACUAGCAGUGCAAUGUUAAAAGGGCAUUGGCCGUGUAGUGCUACCCAGCGCCGGCUG
Get precursor sequence
Structure
        10         20         30        40        50        60
AGGGUCGGCAUGCCUCU-     -|      A        C      UG  A  GUCUGCA 
                  GCUGC UGGCCAG GCUCUUUU ACAUUG  CU CU       C
                  UGAUG GCCGGUU CGGGAAAA UGUAAC  GA GA       C
GUCGGCCGCGACCCAUCG     U^      A        U      GU  C  UCACUGU 
120       110       100        90        80        70
Deep sequencing
Go to detailed chart
CommentThe post-transcriptional addition of a terminal 3' uridine is supported by the existence of multiple examples of 3' DcRNA reads that start with the U in human and several other vertebrates. All other taxa are treated accordingly.
3' NTU Yes
MotifsUG at 5p(-14)
Tissue expression
-   +
Mi Mi Mi Mi Mi Mi Mi Mi
Star sequence

Mmr-Mir-130-P1c_5p*
mirBase accessionNone
Sequence 
0- GCUCUUUUCACAUUGUGCUACU -22
Get sequence
Mature sequence

Mmr-Mir-130-P1c_3p
mirBase accessionMIMAT0049127
Sequence 
40- CAGUGCAAUGUUAAAAGGGCAU -62
Get sequence