MirGeneDB 3.0
MirGeneDB ID

Mmr-Mir-130-P4a

Family name MIR-130 (all species)
Seed AGUGCAA
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues Mmr-Mir-130-P1c  Mmr-Mir-130-P2a  Mmr-Mir-130-P2b 
Orthologues Aca-Mir-130-P4a  Bta-Mir-130-P4a  Cfa-Mir-130-P4a  Cja-Mir-130-P4a  Cmi-Mir-130-P4a  Cpi-Mir-130-P4a  Cpo-Mir-130-P4a  Dno-Mir-130-P4a  Dre-Mir-130-P4a1  Eca-Mir-130-P4a  Ete-Mir-130-P4a  Gga-Mir-130-P4a  Gja-Mir-130-P4a  Hsa-Mir-130-P4a  Laf-Mir-130-P4a  Lch-Mir-130-P4a  Loc-Mir-130-P4a  Mal-Mir-130-P4a1  Mdo-Mir-130-P4a  Mml-Mir-130-P4a  Mmu-Mir-130-P4a  Mun-Mir-130-P4a  Ocu-Mir-130-P4a  Pab-Mir-130-P4a  Pbv-Mir-130-P4a  Rno-Mir-130-P4a  Sha-Mir-130-P4a  Spt-Mir-130-P4a  Sto-Mir-130-P4a  Tgu-Mir-130-P4a  Xla-Mir-130-P4a3  Xla-Mir-130-P4a4  Xtr-Mir-130-P4a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)		 KV890137.1: 616166-616225 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAGGGGGAGGCACUGGCAGGCCUGCCCGACACUCUUUCCCUGUUGCACUACUGUGGGCCACUGGGAAGCAGUGCAAUGAUGAAAGGGCAUCGGUCAGGCCCACUGGGAGGGGGGUGAGGG
Get precursor sequence
Structure
        10          20        30        40        50         
AAGGGGGAGGCACUGGCA--|     C    CA       CC         A  GUGGGC 
                    GGCCUG CCGA  CUCUUUC  UGUUGCACU CU      C
                    CCGGAC GGCU  GGGAAAG  GUAACGUGA GA      A
GGGAGUGGGGGGAGGGUCAC^     U    AC       UA         C  AGGGUC 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsUGUG in loop
Tissue expression
-   +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-130-P4a_5p*
mirBase accessionNone
Sequence 
0- ACUCUUUCCCUGUUGCACUACU -22
Get sequence
Mature sequence

Mmr-Mir-130-P4a_3p
mirBase accessionNone
Sequence 
38- CAGUGCAAUGAUGAAAGGGCAU -60
Get sequence