MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-130-P4a

Family name MIR-130 (all species)
Seed AGUGCAA
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-130-P1a  Mun-Mir-130-P1b  Mun-Mir-130-P1c  Mun-Mir-130-P2a  Mun-Mir-130-P2b  Mun-Mir-130-P3a 
Orthologues Aca-Mir-130-P4a  Bta-Mir-130-P4a  Cfa-Mir-130-P4a  Cja-Mir-130-P4a  Cmi-Mir-130-P4a  Cpi-Mir-130-P4a  Cpo-Mir-130-P4a  Dno-Mir-130-P4a  Dre-Mir-130-P4a1  Eca-Mir-130-P4a  Ete-Mir-130-P4a  Gga-Mir-130-P4a  Gja-Mir-130-P4a  Hsa-Mir-130-P4a  Laf-Mir-130-P4a  Lch-Mir-130-P4a  Loc-Mir-130-P4a  Mal-Mir-130-P4a1  Mdo-Mir-130-P4a  Mml-Mir-130-P4a  Mmr-Mir-130-P4a  Mmu-Mir-130-P4a  Ocu-Mir-130-P4a  Pab-Mir-130-P4a  Pbv-Mir-130-P4a  Rno-Mir-130-P4a  Sha-Mir-130-P4a  Spt-Mir-130-P4a  Sto-Mir-130-P4a  Tgu-Mir-130-P4a  Xla-Mir-130-P4a3  Xla-Mir-130-P4a4  Xtr-Mir-130-P4a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Mun_miRNA_loci)		 130-P4a_LR594642.1:57454522-57454782: 101-161 [+]
Precursor
(pre-Mir +30nt flank)
GGUUGGAAUCUGGAUGCCAGGCUGCCUGCCACUCUUUCCCUGUUGCACUACUGUGAACGUUGGAUGUAGCAGUGCAAUAGUGAAAGGGCGUCAGUCCGCUCCUGGAAUCAGCCGGCCGGGG
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Structure
        10              20        30        40        50          
GGUUGGAAUCUGGAUGCCA------|    CC    ACU     C          A  GUGAACG 
                         GGCUG  UGCC   CUUUC CUGUUGCACU CU       \
                         CUGAC  GCGG   GAAAG GAUAACGUGA GA       U
GGGGCCGGCCGACUAAGGUCCUCGC^    U-    ---     U          C  UGUAGGU 
 .       110       100         90           80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Star sequence

Mun-Mir-130-P4a_5p*
mirBase accessionNone
Sequence 
0- ACUCUUUCCCUGUUGCACUACU -22
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Mature sequence

Mun-Mir-130-P4a_3p
mirBase accessionNone
Sequence 
39- CAGUGCAAUAGUGAAAGGGCGU -61
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