MirGeneDB 3.0
MirGeneDB ID

Mun-Mir-130-P1c

Family name MIR-130 (all species)
Seed AGUGCAA
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-130-P1a  Mun-Mir-130-P1b  Mun-Mir-130-P2a  Mun-Mir-130-P2b  Mun-Mir-130-P3a  Mun-Mir-130-P4a 
Orthologues Aca-Mir-130-P1c  Ami-Mir-130-P1c  Bta-Mir-130-P1c  Cfa-Mir-130-P1c  Cja-Mir-130-P1c  Cpi-Mir-130-P1c  Cpo-Mir-130-P1c  Dno-Mir-130-P1c  Eca-Mir-130-P1c  Ete-Mir-130-P1c  Gja-Mir-130-P1c  Hsa-Mir-130-P1c  Laf-Mir-130-P1c  Lch-Mir-130-P1c  Mdo-Mir-130-P1c  Mml-Mir-130-P1c  Mmr-Mir-130-P1c  Mmu-Mir-130-P1c  Neu-Mir-130-P1c  Oan-Mir-130-P1c  Ocu-Mir-130-P1c  Pab-Mir-130-P1c  Pbv-Mir-130-P1c  Rno-Mir-130-P1c  Sha-Mir-130-P1c  Spt-Mir-130-P1c  Sto-Mir-130-P1c 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Mun_miRNA_loci)		 130-P1d_LR594632.1:653503703-653503964: 101-162 [+]
Precursor
(pre-Mir +30nt flank)
GCCCCCUUAAGUUUGCAGGGUCUGCCUGAGGCCCUUUUCACAUUGUACUACUGUGUCUCACUGUCAGAAGCAGUGCAAUAUCAAAAGGGCAUCAGACAGAUCCUAACGUCACCACAUUAUGC
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Structure
        10          20        30        40        50        60
GCCCCCUUAAGUUUGCA--|      C    G        CAC        A  GUGUCUC 
                   GGGUCUG CUGA GCCCUUUU   AUUGUACU CU       A
                   CCUAGAC GACU CGGGAAAA   UAACGUGA GA       C
CGUAUUACACCACUGCAAU^      A    A        CUA        C  AGACUGU 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Star sequence

Mun-Mir-130-P1c_5p*
mirBase accessionNone
Sequence 
0- GCCCUUUUCACAUUGUACUACU -22
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Mature sequence

Mun-Mir-130-P1c_3p
mirBase accessionNone
Sequence 
40- CAGUGCAAUAUCAAAAGGGCAU -62
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