MirGeneDB 3.0
MirGeneDB ID

Nag-Mir-242-P8

Family name MIR-242 (all species)
Seed UGCGUAG
Species Thorny-headed worm 1 (Neoechinorhynchus agilis)
MiRBase ID
Paralogues Nag-Mir-242-P7 
Orthologues Agr-Mir-242  Bfl-Mir-242  Bko-Mir-242  Bpl-Mir-242  Cbr-Mir-242  Cel-Mir-242  Cte-Mir-242  Eba-Mir-242  Lan-Mir-242  Lhy-Mir-242  Mgi-Mir-242  Mom-Mir-242  Npo-Mir-242  Ofu-Mir-242  Pau-Mir-242  Pca-Mir-242  Pfl-Mir-242  Pmi-Mir-242  Rph-Mir-242  Sko-Mir-242  Snu-Mir-242  Spu-Mir-242  War-Mir-242 
Node of Origin (locus) N.agilis
Node of Origin (family) Bilateria
Genome context
(N_agilis_genome_min1000_bacfree)		 k149_2538: 1655-1711 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CCUAAUGCUCCGUUCUUAGACGGCUAAAGGUUGCGUAGGCUUACUGAACUUAUCGAUAAAGCGAAAGUUCUGAAAUCCUAGGCAUCCUGAUAAAACUUGGAAAAAUUAUCCGACCCG
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Structure
        10        20          30        40        50        
CCUAAUGCUCCGUUCUUAGACGGCUAA--|  U   G    CUUACU      AUCGAU 
                             AGG UGC UAGG      GAACUU      \
                             UCC ACG AUCC      CUUGAA      A
GCCCAGCCUAUUAAAAAGGUUCAAAAUAG^  U   G    UAAAGU      AGCGAA 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Na Na
Mature sequence

Nag-Mir-242-P8_5p
mirBase accessionNone
Sequence 
0- UUGCGUAGGCUUACUGAACUU -21
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Star sequence

Nag-Mir-242-P8_3p*
mirBase accessionNone
Sequence 
36- GUUCUGAAAUCCUAGGCAUCC -57
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