MirGeneDB 3.0
MirGeneDB ID

Pca-Mir-242

Family name MIR-242 (all species)
Seed UGCGUAG
Species Penis worm (Priapulus caudatus)
MiRBase ID
Paralogues
Orthologues Agr-Mir-242  Ava-Mir-242-P9  Ava-Mir-242-P10  Bfl-Mir-242  Bko-Mir-242  Bla-Mir-242-v1  Bla-Mir-242-v2  Bpl-Mir-242  Cbr-Mir-242  Cel-Mir-242  Cte-Mir-242  Eba-Mir-242  Hru-Mir-242-P3a  Hru-Mir-242-P3b  Lan-Mir-242  Lgi-Mir-242-P1  Lgi-Mir-242-P2  Lhy-Mir-242  Mgi-Mir-242  Mom-Mir-242  Nag-Mir-242-P7  Nag-Mir-242-P8  Npo-Mir-242  Ofu-Mir-242  Pau-Mir-242  Pdu-Mir-242-P4a  Pdu-Mir-242-P4b  Pdu-Mir-242-P4c  Pdu-Mir-242-P4d  Pfl-Mir-242  Pmi-Mir-242  Pve-Mir-242-P5  Pve-Mir-242-P6  Rph-Mir-242  Sko-Mir-242  Snu-Mir-242  Spu-Mir-242  War-Mir-242 
Node of Origin (locus) Nephrozoa
Node of Origin (family) Nephrozoa
Genome context
(Priapulus_caudatus_gca000485595v2)		 AXZU02061064.1: 392-448 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGUCGCCGACGACUUCAGUGCACCAGUACAUUGCGUAGACAUUAUGCAUGGUCGGCACCGCACACCUCGCAUUCUGUCUACGCAACAUGCGGGCACGAGCGCCAUCUGUGGGCAACA
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Structure
        10            20        30        40        50        
CGUCGCCGACGACUUCA----|   A  A   CA           UU    AU   CGGCA 
                     GUGC CC GUA  UUGCGUAGACA  AUGC  GGU     \
                     CACG GG CGU  AACGCAUCUGU  UACG  CCA     C
ACAACGGGUGUCUACCGCGAG^   -  -   AC           CU    CU   CACGC 
     110       100          90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Gi In To
Mature sequence

Pca-Mir-242_5p (predicted)
mirBase accessionNone
Sequence 
0- UUGCGUAGACAUUAUGCAUGGU -22
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Star sequence

Pca-Mir-242_3p* (predicted)
mirBase accessionNone
Sequence 
35- CUCGCAUUCUGUCUACGCAACA -57
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