MirGeneDB 3.0
MirGeneDB ID

War-Mir-242

Family name MIR-242 (all species)
Seed UGCGUAG
Species Wirenia (Solenogaster) (Wirenia argentea)
MiRBase ID
Paralogues
Orthologues Agr-Mir-242  Ava-Mir-242-P9  Ava-Mir-242-P10  Bfl-Mir-242  Bko-Mir-242  Bla-Mir-242-v1  Bla-Mir-242-v2  Bpl-Mir-242  Cbr-Mir-242  Cel-Mir-242  Cte-Mir-242  Eba-Mir-242  Hru-Mir-242-P3a  Hru-Mir-242-P3b  Lan-Mir-242  Lgi-Mir-242-P1  Lgi-Mir-242-P2  Lhy-Mir-242  Mgi-Mir-242  Mom-Mir-242  Nag-Mir-242-P7  Nag-Mir-242-P8  Npo-Mir-242  Ofu-Mir-242  Pau-Mir-242  Pca-Mir-242  Pdu-Mir-242-P4a  Pdu-Mir-242-P4b  Pdu-Mir-242-P4c  Pdu-Mir-242-P4d  Pfl-Mir-242  Pmi-Mir-242  Pve-Mir-242-P5  Pve-Mir-242-P6  Rph-Mir-242  Sko-Mir-242  Snu-Mir-242  Spu-Mir-242 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCA_025802215.1_ASM2580221v1_Wirenia)		 WNLI01179040.1: 349-410 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UCGACCAAUCAAAAACAUUUGGUGGCAGUAUUGCGUAGGCGUUGUGCACAGAGUGAAAUUUUCAUUUAUCUGUGUAUAUCAACUAUGCACUAUUGACACUAAAACUUGCAACACUGAUUAUG
Get precursor sequence
Structure
        10          20        30        40        50        60
UCGACCAAUCAAAAACA--|      G     U       GCGU          GUGAAAU 
                   UUUGGUG CAGUA UGCGUAG    UGUGCACAGA       U
                   AAAUCAC GUUAU ACGUAUC    AUAUGUGUCU       U
GUAUUAGUCACAACGUUCA^      A     C       AACU          AUUUACU 
120       110       100        90        80        70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
So
Mature sequence

War-Mir-242_5p (predicted)
mirBase accessionNone
Sequence 
0- UUGCGUAGGCGUUGUGCACAGA -22
Get sequence
Star sequence

War-Mir-242_3p* (predicted)
mirBase accessionNone
Sequence 
40- UGUGUAUAUCAACUAUGCACUA -62
Get sequence