MirGeneDB 3.0
MirGeneDB ID

Eba-Mir-242

Family name MIR-242 (all species)
Seed UGCGUAG
Species Epimenia (Solenogaster) (Epimenia babai)
MiRBase ID
Paralogues
Orthologues Agr-Mir-242  Ava-Mir-242-P9  Ava-Mir-242-P10  Bfl-Mir-242  Bko-Mir-242  Bla-Mir-242-v1  Bla-Mir-242-v2  Bpl-Mir-242  Cbr-Mir-242  Cel-Mir-242  Cte-Mir-242  Hru-Mir-242-P3a  Hru-Mir-242-P3b  Lan-Mir-242  Lgi-Mir-242-P1  Lgi-Mir-242-P2  Lhy-Mir-242  Mgi-Mir-242  Mom-Mir-242  Nag-Mir-242-P7  Nag-Mir-242-P8  Npo-Mir-242  Ofu-Mir-242  Pau-Mir-242  Pca-Mir-242  Pdu-Mir-242-P4a  Pdu-Mir-242-P4b  Pdu-Mir-242-P4c  Pdu-Mir-242-P4d  Pfl-Mir-242  Pmi-Mir-242  Pve-Mir-242-P5  Pve-Mir-242-P6  Rph-Mir-242  Sko-Mir-242  Snu-Mir-242  Spu-Mir-242  War-Mir-242 
Node of Origin (locus) Bilateria
Node of Origin (family) Nephrozoa
Genome context
(GCA_011762755.2_ASM1176275v2_Epimenia)		 WURV02166278.1: 1095-1153 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CCGAAAAAUUGUUCCAGUUCUGUGACAUUGUUGCGUAGGCUUUAUGCACAGAGUGAAAUCGUCUUUCUGUGUAUAUCACCUACACAUCACUGUAACGAACAGCAUCGUGCAGUACAUUA
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Structure
        10           20        30        40        50         
CCGAAAAAUUGUUCCAG---|  U  G   U  U  C     CUU          GUGAAA 
                    UUC GU ACA UG UG GUAGG   UAUGCACAGA      \
                    AAG CA UGU AC AC CAUCC   AUAUGUGUCU      U
AUUACAUGACGUGCUACGAC^  -  A   C  U  A     ACU          UUCUGC 
       110       100         90        80        70        60
Deep sequencing
3' NTU Unknown
MotifsUGUG in loop
Tissue expression
-   +
To
Mature sequence

Eba-Mir-242_5p (predicted)
mirBase accessionNone
Sequence 
0- UUGCGUAGGCUUUAUGCACAGA -22
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Star sequence

Eba-Mir-242_3p* (predicted)
mirBase accessionNone
Sequence 
37- UGUGUAUAUCACCUACACAUCA -59
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