MirGeneDB 3.0

MirGeneDB ID

Oan-Mir-92-P1a8

Family name MIR-92 (all species)
Seed AUUGCAC
Species Platypus (Ornithorhynchus anatinus)
MiRBase ID oan-mir-92b
Paralogues Oan-Mir-92-P1a5  Oan-Mir-92-P1a6  Oan-Mir-92-P1a7  Oan-Mir-92-P1c  Oan-Mir-92-P1d  Oan-Mir-92-P2a  Oan-Mir-92-P2c  Oan-Mir-92-P2d 
Orthologues Aca-Mir-92-P1a  Ami-Mir-92-P1a  Asu-Mir-92  Bfl-Mir-92-o1  Bla-Mir-92-o1  Bta-Mir-92-P1a  Cel-Mir-92  Cfa-Mir-92-P1a  Cja-Mir-92-P1a  Cli-Mir-92-P1a  Cmi-Mir-92-P1a  Cpi-Mir-92-P1a  Cpo-Mir-92-P1a  Dno-Mir-92-P1a  Eca-Mir-92-P1a  Esc-Mir-92  Ete-Mir-92-P1a  Gga-Mir-92-P1a  Gja-Mir-92-P1a  Gsp-Mir-92  Hmi-Mir-92  Hsa-Mir-92-P1a  Isc-Mir-92  Laf-Mir-92-P1a  Lch-Mir-92-P1a  Loc-Mir-92-P1a  Mdo-Mir-92-P1a  Mml-Mir-92-P1a  Mmr-Mir-92-P1a  Mmu-Mir-92-P1a  Mun-Mir-92-P1a  Obi-Mir-92  Ocu-Mir-92-P1a  Pab-Mir-92-P1a  Pbv-Mir-92-P1a  Rno-Mir-92-P1a  Sha-Mir-92-P1a  Sme-Mir-92  Spt-Mir-92-P1a  Sto-Mir-92-P1a  Tgu-Mir-92-P1a  Xtr-Mir-92-P1a 
Node of Origin (locus) O. anatinus
Node of Origin (family) Bilateria
Genome context
(mOrnAna1.p.v1_plustraces)
NC_041728.1: 18870026-18870082 [-]
Precursor
(pre-Mir +30nt flank)
AGCCAGGAAAAGUCAAACCCCUUUCUAUGCAGGUUGGGAUCAGUGGAAAUGCUGUUUGCCUUUGGUAUUGCACUUGUCCCAGCCUGUUGAGAUUACUGAAGAUUGUGGCUGAAAGAU
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Structure
        10        20          30        40        50        
AGCCAGGAAAAGUCAAACCCCUU--|  AU            C    GA      GUUU 
                         UCU  GCAGGUUGGGAU AGUG  AAUGCU    G
                         AGA  UGUCCGACCCUG UCAC  UUAUGG    C
UAGAAAGUCGGUGUUAGAAGUCAUU^  GU            U    G-      UUUC 
     110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Br Ce He Ki Te
Star sequence

Oan-Mir-92-P1a8_5p* (predicted)

mirBase accessionNone
Sequence
0- AGGUUGGGAUCAGUGGAAAUGCU -23
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Mature sequence

Oan-Mir-92-P1a8_3p

mirBase accessionMIMAT0006918
Sequence
35- UAUUGCACUUGUCCCAGCCUGU -57
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