MirGeneDB 3.0
MirGeneDB ID

Lch-Mir-92-P1a

Family name MIR-92 (all species)
Seed AUUGCAC
Species Coelacanth (Latimeria chalumnae)
MiRBase ID
Paralogues Lch-Mir-92-P1d  Lch-Mir-92-P2c  Lch-Mir-92-P2d 
Orthologues Aca-Mir-92-P1a  Ami-Mir-92-P1a  Asu-Mir-92  Bfl-Mir-92-o1  Bla-Mir-92-o1  Bta-Mir-92-P1a  Cel-Mir-92  Cfa-Mir-92-P1a  Cja-Mir-92-P1a  Cli-Mir-92-P1a  Cmi-Mir-92-P1a  Cpi-Mir-92-P1a  Cpo-Mir-92-P1a  Dno-Mir-92-P1a  Dre-Mir-92-P1a1  Dre-Mir-92-P1a2  Eca-Mir-92-P1a  Esc-Mir-92  Ete-Mir-92-P1a  Gga-Mir-92-P1a  Gja-Mir-92-P1a  Gmo-Mir-92-P1a1  Gmo-Mir-92-P1a2  Gsp-Mir-92  Hmi-Mir-92  Hsa-Mir-92-P1a  Isc-Mir-92  Laf-Mir-92-P1a  Loc-Mir-92-P1a  Mal-Mir-92-P1a1  Mal-Mir-92-P1a2  Mdo-Mir-92-P1a  Mml-Mir-92-P1a  Mmr-Mir-92-P1a  Mmu-Mir-92-P1a  Mun-Mir-92-P1a  Oan-Mir-92-P1a5  Oan-Mir-92-P1a6  Oan-Mir-92-P1a7  Oan-Mir-92-P1a8  Obi-Mir-92  Ocu-Mir-92-P1a  Pab-Mir-92-P1a  Pbv-Mir-92-P1a  Rno-Mir-92-P1a  Sha-Mir-92-P1a  Sme-Mir-92  Spt-Mir-92-P1a  Sto-Mir-92-P1a  Tgu-Mir-92-P1a  Tni-Mir-92-P1a1  Tni-Mir-92-P1a2  Xla-Mir-92-P1a3  Xla-Mir-92-P1a4  Xtr-Mir-92-P1a 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(LatCha1_add)		 JH129267.1: 172327-172385 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AACUGUAUGAAUUGGUGCCCCUUUCUACGCAGGUUGGGAUUAGUUGCAAUGCUGUAUGUUGCUGAAGUAUUGCACUUGUCCCGGCCUGUUGAGGACAGUGGGGAUUGAGGCUUGAGGAU
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Structure
        10        20          30        40        50         
AACUGUAUGAAUUGGUGC  -  -|   AC            U   U        GUAUG 
                  CC CU UUCU  GCAGGUUGGGAU AGU GCAAUGCU     U
                  GG GA AGGA  UGUCCGGCCCUG UCA CGUUAUGA     U
UAGGAGUUCGGAGUUAGG  U  C^   GU            U   -        AGUCG 
       110       100        90        80         70        60
Deep sequencing
3' NTU Unknown
MotifsNo
Star sequence

Lch-Mir-92-P1a_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGUUGGGAUUAGUUGCAAUGCU -23
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Mature sequence

Lch-Mir-92-P1a_3p (predicted)
mirBase accessionNone
Sequence 
37- UAUUGCACUUGUCCCGGCCUGU -59
Get sequence