MirGeneDB 2.1

MirGeneDB ID

Mal-Mir-92-P1a1

Family name MIR-92 (all species)
Seed AUUGCAC
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-92-P1a2  Mal-Mir-92-P1d  Mal-Mir-92-P2d 
Orthologues Aca-Mir-92-P1a  Ami-Mir-92-P1a  Asu-Mir-92  Bfl-Mir-92-o1  Bla-Mir-92-o1  Bta-Mir-92-P1a  Cel-Mir-92  Cfa-Mir-92-P1a  Cli-Mir-92-P1a  Cmi-Mir-92-P1a  Cpi-Mir-92-P1a  Cpo-Mir-92-P1a  Dno-Mir-92-P1a  Dre-Mir-92-P1a1  Esc-Mir-92  Ete-Mir-92-P1a  Gga-Mir-92-P1a  Gja-Mir-92-P1a  Gmo-Mir-92-P1a1  Hsa-Mir-92-P1a  Isc-Mir-92  Lch-Mir-92-P1a  Loc-Mir-92-P1a  Mdo-Mir-92-P1a  Mml-Mir-92-P1a  Mmu-Mir-92-P1a  Mun-Mir-92-P1a  Obi-Mir-92  Ocu-Mir-92-P1a  Pbv-Mir-92-P1a  Rno-Mir-92-P1a  Sha-Mir-92-P1a  Sme-Mir-92  Spt-Mir-92-P1a  Sto-Mir-92-P1a  Tgu-Mir-92-P1a  Tni-Mir-92-P1a1  Xtr-Mir-92-P1a 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Bilateria
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)
KV884692.1: 2412657-2412714 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUGGAUAUUUGGAGAUGUCCCUUCCAGUGCAGGUGGGGAUUAGUAGCAAUGCUGUGUACCUGGAGGUAUUGCACUUGUCCCGGCCUGUGUAGGAAUGAGAUGGAGCUGACCUGGAUCC
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Structure
        10        20          30        40        50         
UUGGAUAUUUGGAGAUGUCCC--|   A UG     G     U   A        GUGUA 
                       UUCC G  CAGGU GGGAU AGU GCAAUGCU     \
                       AAGG U  GUCCG CCCUG UCA CGUUAUGG     C
CCUAGGUCCAGUCGAGGUAGAGU^   A GU     G     U   -        AGGUC 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
 +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-92-P1a1_5p*

mirBase accessionNone
Sequence
0- AGGUGGGGAUUAGUAGCAAUGCU -23
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Mature sequence

Mal-Mir-92-P1a1_3p

mirBase accessionNone
Sequence
36- UAUUGCACUUGUCCCGGCCUGU -58
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