MirGeneDB 2.1

MirGeneDB ID

Ete-Mir-208-P1a

Family name MIR-208 (all species)
Seed UAAGACG
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues Ete-Mir-208-P1b  Ete-Mir-208-P2 
Orthologues Bta-Mir-208-P1  Cfa-Mir-208-P1  Cpo-Mir-208-P1  Dno-Mir-208-P1  Dre-Mir-208-P1  Ebu-Mir-208-o1  Gmo-Mir-208-P1  Hsa-Mir-208-P1  Lch-Mir-208-P1  Mal-Mir-208-P1  Mdo-Mir-208-P1  Mml-Mir-208-P1  Mmu-Mir-208-P1  Mun-Mir-208-P1  Ocu-Mir-208-P1  Rno-Mir-208-P1  Sha-Mir-208-P1  Sto-Mir-208-P1 
Node of Origin (locus) E. telfairi
Node of Origin (family) Vertebrata
Genome context
(echTel2)
Precursor
(pre-Mir +30nt flank)
AAGCUUUUUGCUCGCGUUAUGUUUCUCAUCCGAAUAUAAGACGAACAAAAGGUUUGU
Get precursor sequence
Structure
          10        20        
--|         C   CG        CUC 
  AAGCUUUUUG UCG  UUAUGUUU   \
  UUUGGAAAAC AGC  AAUAUAAG   A
UG^         A   AG        CCU 
      50        40        30
Deep sequencing
3' NTU No
MotifsNo
Star sequence

Ete-Mir-208-P1a_5p*

mirBase accessionNone
Sequence
0- AAGCUUUUUGCUCGCGUUAUGU -22
Get sequence
Mature sequence

Ete-Mir-208-P1a_3p

mirBase accessionNone
Sequence
35- AUAAGACGAACAAAAGGUUUGU -57
Get sequence