MirGeneDB 3.0
MirGeneDB ID

Sto-Mir-208-P1

Family name MIR-208 (all species)
Seed UAAGACG
Species Cloudy Catshark (Scyliorhinus torazame)
MiRBase ID
Paralogues
Orthologues Bta-Mir-208-P1-v1  Bta-Mir-208-P1-v2  Cfa-Mir-208-P1-v1  Cfa-Mir-208-P1-v2  Cja-Mir-208-P1  Cpo-Mir-208-P1-v1  Cpo-Mir-208-P1-v2  Dno-Mir-208-P1-v1  Dno-Mir-208-P1-v2  Dre-Mir-208-P1  Ebu-Mir-208-o1  Eca-Mir-208-P1-v1  Eca-Mir-208-P1-v2  Ete-Mir-208-P1a  Ete-Mir-208-P1b  Gmo-Mir-208-P1  Hsa-Mir-208-P1-v1  Hsa-Mir-208-P1-v2  Laf-Mir-208-P1  Lch-Mir-208-P1  Loc-Mir-208-P1c  Loc-Mir-208-P1d  Loc-Mir-208-P1e  Mal-Mir-208-P1  Mdo-Mir-208-P1  Mml-Mir-208-P1-v1  Mml-Mir-208-P1-v2  Mmr-Mir-208-P1-v1  Mmr-Mir-208-P1-v2  Mmu-Mir-208-P1-v1  Mmu-Mir-208-P1-v2  Mun-Mir-208-P1  Neu-Mir-208-P1  Ocu-Mir-208-P1-v1  Ocu-Mir-208-P1-v2  Pab-Mir-208-P1  Rno-Mir-208-P1-v1  Rno-Mir-208-P1-v2  Sha-Mir-208-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_003427355_STO_add)		 BFAA01271854.1: 421-480 [+]
Precursor
(pre-Mir +30nt flank)
CGUUACCUGCAGACAUUCCUCCAGACUGUCAGAUCUUUUGUUCUUUUUAAUAUUGAGUUACGAUAUGUUUAAGACGAACAGAAGAUUUUGCAGUUUGGGGGAUUAGCGCCUGGCCUGAAG
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Structure
        10          20        30        40        50         
CGUUACCUGCAGACAUU--|           C             U      UAUUGAGU 
                   CCUCCAGACUGU AGAUCUUUUGUUC UUUUAA        U
                   GGGGGUUUGACG UUUAGAAGACAAG AGAAUU        A
GAAGUCCGGUCCGCGAUUA^           U             C      UGUAUAGC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Sto-Mir-208-P1_5p*
mirBase accessionNone
Sequence 
0- AGAUCUUUUGUUCUUUUUAAUA -22
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Mature sequence

Sto-Mir-208-P1_3p
mirBase accessionNone
Sequence 
38- UUAAGACGAACAGAAGAUUUUG -60
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