MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-208-P1

Family name MIR-208 (all species)
Seed UAAGACG
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-736
Paralogues
Orthologues Bta-Mir-208-P1-v1  Bta-Mir-208-P1-v2  Cfa-Mir-208-P1-v1  Cfa-Mir-208-P1-v2  Cja-Mir-208-P1  Cpo-Mir-208-P1-v1  Cpo-Mir-208-P1-v2  Dno-Mir-208-P1-v1  Dno-Mir-208-P1-v2  Ebu-Mir-208-o1  Eca-Mir-208-P1-v1  Eca-Mir-208-P1-v2  Ete-Mir-208-P1a  Ete-Mir-208-P1b  Gmo-Mir-208-P1  Hsa-Mir-208-P1-v1  Hsa-Mir-208-P1-v2  Laf-Mir-208-P1  Lch-Mir-208-P1  Loc-Mir-208-P1c  Loc-Mir-208-P1d  Loc-Mir-208-P1e  Mal-Mir-208-P1  Mdo-Mir-208-P1  Mml-Mir-208-P1-v1  Mml-Mir-208-P1-v2  Mmr-Mir-208-P1-v1  Mmr-Mir-208-P1-v2  Mmu-Mir-208-P1-v1  Mmu-Mir-208-P1-v2  Mun-Mir-208-P1  Neu-Mir-208-P1  Ocu-Mir-208-P1-v1  Ocu-Mir-208-P1-v2  Pab-Mir-208-P1  Rno-Mir-208-P1-v1  Rno-Mir-208-P1-v2  Sha-Mir-208-P1  Sto-Mir-208-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(danRer11)		 chr2: 24261228-24261283 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUUAAGGUUUAACUUCUCUACUGACAGAGAAGCUUUUUGUUUGUGUUAUGUUUAUUUUCAAAUGUAAGACGAACAAAAAGUUUUUCUGUUAGUAGGCCAAGCUUCCCUAAACAGA
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Structure
        10          20        30        40        50       
CUUUAAGGUUUAACUUC--|                           G      UUAU 
                   UCUACUGACAGAGAAGCUUUUUGUUUGU UUAUGU    U
                   GGAUGAUUGUCUUUUUGAAAAACAAGCA AAUGUA    U
AGACAAAUCCCUUCGAACC^                           G      AACU 
    110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Star sequence

Dre-Mir-208-P1_5p*
mirBase accessionNone
Sequence 
0- AAGCUUUUUGUUUGUGUUAUGU -22
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Mature sequence

Dre-Mir-208-P1_3p
mirBase accessionMIMAT0003767
Sequence 
34- GUAAGACGAACAAAAAGUUUUU -56
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Proposed targets TargetScanFish: dre-miR-736