Mir-208-P1

MirGeneDB ID

Mun-Mir-208-P1

Family name

MIR-208 (all species)

Seed

UAAGACG

Species

Microcaecilia (Microcaecilia unicolor)

MiRBase ID

Paralogues

Orthologues

Bta-Mir-208-P1-v1 Bta-Mir-208-P1-v2 Cfa-Mir-208-P1-v1 Cfa-Mir-208-P1-v2 Cja-Mir-208-P1 Cpo-Mir-208-P1-v1 Cpo-Mir-208-P1-v2 Dno-Mir-208-P1-v1 Dno-Mir-208-P1-v2 Dre-Mir-208-P1 Ebu-Mir-208-o1 Eca-Mir-208-P1-v1 Eca-Mir-208-P1-v2 Ete-Mir-208-P1a Ete-Mir-208-P1b Gmo-Mir-208-P1 Hsa-Mir-208-P1-v1 Hsa-Mir-208-P1-v2 Laf-Mir-208-P1 Lch-Mir-208-P1 Loc-Mir-208-P1c Loc-Mir-208-P1d Loc-Mir-208-P1e Mal-Mir-208-P1 Mdo-Mir-208-P1 Mml-Mir-208-P1-v1 Mml-Mir-208-P1-v2 Mmr-Mir-208-P1-v1 Mmr-Mir-208-P1-v2 Mmu-Mir-208-P1-v1 Mmu-Mir-208-P1-v2 Neu-Mir-208-P1 Ocu-Mir-208-P1-v1 Ocu-Mir-208-P1-v2 Pab-Mir-208-P1 Rno-Mir-208-P1-v1 Rno-Mir-208-P1-v2 Sha-Mir-208-P1 Sto-Mir-208-P1

Node of Origin (locus)

Vertebrata

Node of Origin (family)

Vertebrata

Genome context
(Mun_miRNA_loci)

208-P2_LR594645.1:30915376-30915635: 101-160 [+]

Precursor
(pre-Mir +30nt flank)

CCGCAGUCACCAUUUCUUCUUCUAACAGAGAAACUUUUUGUUUGCUUUUAUGUUUUGGAUUGGAAUAUAUAAGACGAACAAAAGGUUUCUCCGUUGGCAGAAUCACCGCUUCCAGCCAAA

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Structure

        10          20        30        40         50         
CCGCAGUCACCAUUUCU--   U     A                 -|  U   GUUUUGG 
                   UCU CUAAC GAGAAACUUUUUGUUUG CUU UAU       \
                   AGA GGUUG CUCUUUGGAAAACAAGC GAA AUA       A
AAACCGACCUUCGCCACUA   C     C                 A^  U   UAAGGUU 
.       110       100        90        80        70        60

Deep sequencing

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3' NTU

Unknown

Motifs

CNNC at 3p(+17)

Tissue expression

To

Star sequence

Mun-Mir-208-P1_5p*

mirBase accession

None

Sequence

0- AAACUUUUUGUUUGCUUUUAU -21

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Mature sequence

Mun-Mir-208-P1_3p

mirBase accession

None

Sequence

38- AUAAGACGAACAAAAGGUUUCU -60

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