MirGeneDB 3.0
MirGeneDB ID

Ebu-Mir-208-o1

Family name MIR-208 (all species)
Seed UAAGACG
Species Inshore hagfish (Eptatretus burgeri)
MiRBase ID
Paralogues
Orthologues Bta-Mir-208-P1-v1  Bta-Mir-208-P1-v2  Cfa-Mir-208-P1-v1  Cfa-Mir-208-P1-v2  Cja-Mir-208-P1  Cpo-Mir-208-P1-v1  Cpo-Mir-208-P1-v2  Dno-Mir-208-P1-v1  Dno-Mir-208-P1-v2  Dre-Mir-208-P1  Eca-Mir-208-P1-v1  Eca-Mir-208-P1-v2  Ete-Mir-208-P1a  Ete-Mir-208-P1b  Gmo-Mir-208-P1  Hsa-Mir-208-P1-v1  Hsa-Mir-208-P1-v2  Laf-Mir-208-P1  Lch-Mir-208-P1  Loc-Mir-208-P1c  Loc-Mir-208-P1d  Loc-Mir-208-P1e  Mal-Mir-208-P1  Mdo-Mir-208-P1  Mml-Mir-208-P1-v1  Mml-Mir-208-P1-v2  Mmr-Mir-208-P1-v1  Mmr-Mir-208-P1-v2  Mmu-Mir-208-P1-v1  Mmu-Mir-208-P1-v2  Mun-Mir-208-P1  Neu-Mir-208-P1  Ocu-Mir-208-P1-v1  Ocu-Mir-208-P1-v2  Pab-Mir-208-P1  Rno-Mir-208-P1-v1  Rno-Mir-208-P1-v2  Sha-Mir-208-P1  Sto-Mir-208-P1 
Node of Origin (locus) E. burgeri
Node of Origin (family) Vertebrata
Genome context
(Eburgeri_3)		 FYBX02010443.1: 851102-851161 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGAGGCCUAAUUUGUUUCCCCUGGCGACCACGCUCCUUGCUGGUUUUAUUUCCCCGUCGCUCUUCAAAUAAGACGGGCAAGAAGUGUGCCCUGACAGGGGGCCUUGCUUACAUUGGCCA
Get precursor sequence
Structure
        10         20         30        40        50         
CUGAGGCCUAAUUUGUU-       G  AC-|     C      G         CCCCGU 
                  UCCCCUG CG   CACGCU CUUGCU GUUUUAUUU      C
                  GGGGGAC GU   GUGUGA GAACGG CAGAAUAAA      G
ACCGGUUACAUUCGUUCC       A  CCC^     A      G         CUUCUC 
.       110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Ebu-Mir-208-o1_5p* (predicted)
mirBase accessionNone
Sequence 
0- ACGCUCCUUGCUGGUUUUAUUU -22
Get sequence
Mature sequence

Ebu-Mir-208-o1_3p
mirBase accessionNone
Sequence 
38- AUAAGACGGGCAAGAAGUGUGC -60
Get sequence