MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-208-P1

Family name MIR-208 (all species)
Seed UAAGACG
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Mir-208-P2 
Orthologues Bta-Mir-208-P1-v1  Bta-Mir-208-P1-v2  Cfa-Mir-208-P1-v1  Cfa-Mir-208-P1-v2  Cja-Mir-208-P1  Cpo-Mir-208-P1-v1  Cpo-Mir-208-P1-v2  Dno-Mir-208-P1-v1  Dno-Mir-208-P1-v2  Dre-Mir-208-P1  Ebu-Mir-208-o1  Eca-Mir-208-P1-v1  Eca-Mir-208-P1-v2  Ete-Mir-208-P1a  Ete-Mir-208-P1b  Gmo-Mir-208-P1  Hsa-Mir-208-P1-v1  Hsa-Mir-208-P1-v2  Laf-Mir-208-P1  Lch-Mir-208-P1  Loc-Mir-208-P1c  Loc-Mir-208-P1d  Loc-Mir-208-P1e  Mal-Mir-208-P1  Mdo-Mir-208-P1  Mml-Mir-208-P1-v1  Mml-Mir-208-P1-v2  Mmr-Mir-208-P1-v1  Mmr-Mir-208-P1-v2  Mmu-Mir-208-P1-v1  Mmu-Mir-208-P1-v2  Mun-Mir-208-P1  Neu-Mir-208-P1  Ocu-Mir-208-P1-v1  Ocu-Mir-208-P1-v2  Pab-Mir-208-P1  Rno-Mir-208-P1-v1  Rno-Mir-208-P1-v2  Sto-Mir-208-P1 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(DEVIL_add)		 GL834496.1: 1663143-1663199 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACUCCUUCCCUGCAUCUUCUCCUCUCAGGGAAGCUUUUUGCUCGCAUUAUAUUUUGGAUUUGAAUAUAAGACGAACAAAAGGUUUGUCUGUGUGCAGAGAGUUACAACUUGUGGCAG
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Structure
        10        20             30        40        50        
ACUCCUUCCCUGCAUCUUCUC    -----|   G          C   CA      UUUGG 
                     CUCU     CAGG AAGCUUUUUG UCG  UUAUAU     \
                     GAGA     GUCU UUUGGAAAAC AGC  AAUAUA     A
GACGGUGUUCAACAUUGA---    CGUGU^   G          A   AG      AGUUU 
     110       100           90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Star sequence

Sha-Mir-208-P1_5p* (predicted)
mirBase accessionNone
Sequence 
0- AAGCUUUUUGCUCGCAUUAUAU -22
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Mature sequence

Sha-Mir-208-P1_3p
mirBase accessionNone
Sequence 
35- AUAAGACGAACAAAAGGUUUGU -57
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