MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-92-P1d

Family name MIR-92 (all species)
Seed AUUGCAC
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-92-P1a  Gja-Mir-92-P1c  Gja-Mir-92-P2a  Gja-Mir-92-P2c 
Orthologues Ami-Mir-92-P1d  Asu-Mir-92  Bfl-Mir-92-o1  Bla-Mir-92-o1  Bta-Mir-92-P1d  Cel-Mir-92  Cfa-Mir-92-P1d  Cja-Mir-92-P1d  Cmi-Mir-92-P1d  Cpi-Mir-92-P1d  Cpo-Mir-92-P1d  Dno-Mir-92-P1d  Dre-Mir-92-P1d  Eca-Mir-92-P1d  Esc-Mir-92  Ete-Mir-92-P1d  Gsp-Mir-92  Hmi-Mir-92  Hsa-Mir-92-P1d  Isc-Mir-92  Laf-Mir-92-P1d  Lch-Mir-92-P1d  Loc-Mir-92-P1d  Mal-Mir-92-P1d  Mdo-Mir-92-P1d  Mml-Mir-92-P1d  Mmr-Mir-92-P1d  Mmu-Mir-92-P1d  Mun-Mir-92-P1d  Oan-Mir-92-P1d  Obi-Mir-92  Ocu-Mir-92-P1d  Pab-Mir-92-P1d  Pbv-Mir-92-P1d  Rno-Mir-92-P1d  Sha-Mir-92-P1d  Sme-Mir-92  Spt-Mir-92-P1d  Sto-Mir-92-P1d  Tgu-Mir-92-P1d  Xla-Mir-92-P1d1  Xla-Mir-92-P1d2  Xtr-Mir-92-P1d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015171502.1: 2482708-2482770 [+]
Precursor
(pre-Mir +30nt flank)
GGACCGUCGCGGGCUUUCUGGGGCGGCUGGAGGGAUGGGACGGAGUGCAGUGUUGUUUGUUCUCCCGCUAAUAUUGCACUUGUCCCGGCCUCCUGCCGUCCUGGGUUCACGUACGGGUGCCUG
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Structure
        10          20        30        40        50        60  
GGACCGUCGCGGGCUUU--|UG       U     GA       G           GUUUGUU 
                   C  GGGCGGC GGAGG  UGGGACG AGUGCAGUGUU       \
                   G  CCUGCCG CCUCC  GCCCUGU UCACGUUAUAA       C
GUCCGUGGGCAUGCACUUG^GU       U     G-       -           UCGCCCU 
 120       110       100        90          80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Gja-Mir-92-P1d_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGGAUGGGACGGAGUGCAGUGUU -24
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Mature sequence

Gja-Mir-92-P1d_3p
mirBase accessionNone
Sequence 
41- UAUUGCACUUGUCCCGGCCUCC -63
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