MirGeneDB 2.1

MirGeneDB ID

Mml-Mir-15-P1d

Family name MIR-15 (all species)
Seed AGCAGCA
Species Rhesus monkey (Macaca mulatta)
MiRBase ID mml-mir-497
Paralogues Mml-Mir-15-P1a  Mml-Mir-15-P1b  Mml-Mir-15-P1c  Mml-Mir-15-P2a  Mml-Mir-15-P2b  Mml-Mir-15-P2c  Mml-Mir-15-P2d 
Orthologues Ami-Mir-15-P1d  Bta-Mir-15-P1d  Cfa-Mir-15-P1d  Cin-Mir-15-P1  Cpo-Mir-15-P1d  Dno-Mir-15-P1d  Dre-Mir-15-P1d  Ete-Mir-15-P1d  Hsa-Mir-15-P1d  Loc-Mir-15-P1d  Mdo-Mir-15-P1d  Mmu-Mir-15-P1d  Oan-Mir-15-P1d  Ocu-Mir-15-P1d  Rno-Mir-15-P1d  Sha-Mir-15-P1d  Sto-Mir-15-P1d 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Olfactores
Genome context
(rheMac8_trace)
chr16: 6978534-6978595 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-15-P1d)
Mir-15-P2d chr16: 6978222-6978282 [-] UCSC Ensembl
Mir-15-P1d chr16: 6978534-6978595 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUCAGCCCACCCCGGUCCUGCUCCCGCCCCAGCAGCACACUGUGGUUUGUACGGCACUGUGGCCACGUCCAAACCACACUGUGGUGUUAGAGCGAGGGUGGGGGAGGCACCGCCGAGGCUU
Get precursor sequence
Structure
        10          20        30        40        50        60
UCUCAGCCCACCCCGGU--| UG   C   CCC    G    C         UACGGCACU 
                   CC  CUC CGC   AGCA CACA UGUGGUUUG         G
                   GG  GGG GCG   UUGU GUGU ACACCAAAC         U
UUCGGAGCCGCCACGGAGG^ GU   A   AGA    G    C         CUGCACCGG 
120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo Br Br Br He Ki Li Lu Ly Sk Sp Te Th
Mature sequence

Mml-Mir-15-P1d_5p

mirBase accessionMIMAT0006359
Sequence
0- CAGCAGCACACUGUGGUUUGUA -22
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Proposed targets TargetScanVert: mml-miR-497-5p
Star sequence

Mml-Mir-15-P1d_3p*

mirBase accessionMIMAT0026887
Sequence
40- CAAACCACACUGUGGUGUUAGA -62
Get sequence
Proposed targets TargetScanVert: mml-miR-497-3p